Gene PCC8801_3958 details

Gene Information

• Locus tag: PCC8801_3958
• ID: 7105823
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 4146382
• End bp: 4147110
• Gene Length: 729 bp
• Protein Length: 242 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 643476955
• Product: transcriptional regulator, TetR family
• Protein accession: YP_002374056
• Protein GI: 218248685
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTCTG TAAAATCTGG GGTAACTGTG GCAACGACAA AAGCTGAAAA GGTCAAAAAT 
GCTAAACCTC TTCGAGATGC TCAAGCAACG CAAGCGGTAA TTTTAGCCGC CGCAGAAGTG 
GAATTTGCTC AAAATGGTTT CACGGCTGCC AGAACCGAGG CGATCGCCGC TAAAACTGGA 
GTGGCAAAAT CAATGATTTA TTACTACTTC AAAGACAAAG AAGGGTTGTA TCGAGCCGTT 
TTGGAGCGAT CACACGCTGA CCTTTTACAA ACGGCTCAGA ACCTAGAACT CGAGCAGCTA 
TCCCCTGAAG TCGCGTTAGA AAAGTTTTTG AGAGCATTGC TCGATTGCGT ATCTCGTAAT 
CCCAGACTCC CGACGATCAT GTTTTTTGAA GCAGTGCAAA ACCAGGGGAA ATACTACAAA 
AATAGTCGCT CGCCCAGTAT TGATACAGTT TTAATTAGAA TTTTGGAAAG AGGTGTGACG 
ACAGGAGTAT TTCGTTCGCT TGATCCCTTT CAATCAGCCA TTAACATCAT GGGAACTTGC 
CTGTTCTACT TCATTGGTAC TGGAAACATC CAGCAGTTTC CTCAAGGAAA GCGACTTCTC 
AGTCAATCCA TGCTAGAGCA GCATTCTCAA GAAGCGATCG CACTAATCTT GGCAGGTGTG 
CGCAAAGTTG GACTTGAGAA AATAGAGGAA ATGTCATTTT TTATTTCTCC TATGCAGGAA 
ATAAAGTAA 

 

Protein sequence

MNSVKSGVTV ATTKAEKVKN AKPLRDAQAT QAVILAAAEV EFAQNGFTAA RTEAIAAKTG 
VAKSMIYYYF KDKEGLYRAV LERSHADLLQ TAQNLELEQL SPEVALEKFL RALLDCVSRN 
PRLPTIMFFE AVQNQGKYYK NSRSPSIDTV LIRILERGVT TGVFRSLDPF QSAINIMGTC 
LFYFIGTGNI QQFPQGKRLL SQSMLEQHSQ EAIALILAGV RKVGLEKIEE MSFFISPMQE 
IK