Gene PCC8801_3908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3908 
Symbol 
ID7103861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp4096595 
End bp4097299 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content46% 
IMG OID643476911 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_002374012 
Protein GI218248641 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACTAT CTGATCGCAT TATTGTTCCC TTAGATGTCC CCACACTCAA TGAGGCGATC 
GCCTTGTTAG ATCAACTCCC TGAAGTCAGT TTTTGGAAGG TGGGGTTAGA GTTATTTGTT 
GCCACAGGGT CAGATATCCT TAAAATCCTG AAAGAAAGGC AAAAACGCAT CTTTCTTGAC 
CTTAAATTCC ATGATATCCC CAATACTGTT GCCGGAGCTT GTCGTAGTGC CAGTCAATAT 
CAAGTAAACT TTCTCACGCT TCATGCTACC GCCGGACGCA ATGCCCTGCA AGCAGCCGCA 
CAAGCCATGA GTCAAACCCC TTCCCCTCCC CAATTACTGG CTATTACGCT GTTAACCAGT 
TTAAACTCAC GGGAATTAGC ATTTGATTTA AAAATCCCCT TAGAATTACC AGAATATGCG 
CTACAAATGG CACTTTTAGC CCAAGAATCA GGCATGAATG GGGTAGTCTG TTCTCCTCAA 
GAAGTCCGTC AATTGCGTCA CGTCTGTGGG GATAAGTTTC TCTTGGTTTG TCCAGGGGTG 
CGTCCTAATT GGTCTAAAAT AGGAGATCAG CGACGGGTAA TGACCCCTGT TGAAGCCATA 
CAAGCAGGTG CGGACTATCT AGTCATTGGT CGTCCCATTA CCATGGCAGA TGATCCCGTT 
GCAGCTTGGG ACAAAATTCG CCAAGAATTA GACGAAGTAT GCTGA
 
Protein sequence
MSLSDRIIVP LDVPTLNEAI ALLDQLPEVS FWKVGLELFV ATGSDILKIL KERQKRIFLD 
LKFHDIPNTV AGACRSASQY QVNFLTLHAT AGRNALQAAA QAMSQTPSPP QLLAITLLTS 
LNSRELAFDL KIPLELPEYA LQMALLAQES GMNGVVCSPQ EVRQLRHVCG DKFLLVCPGV 
RPNWSKIGDQ RRVMTPVEAI QAGADYLVIG RPITMADDPV AAWDKIRQEL DEVC