Gene PCC8801_3884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3884 
Symbol 
ID7103841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp4068288 
End bp4069139 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content39% 
IMG OID643476888 
ProductABC-2 type transporter 
Protein accessionYP_002373989 
Protein GI218248618 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGACAAA GCTTGATTAA ACATACTCCA GAAAGCCAAT TACGCCATCC TAGGCAGTTG 
TTTAAGCAGA TGTTAGTAGA CTTACTGGCA TCTCGTGAAC TTGCCTGGCA ATTATTAATA
CGAGATCTTA GGGCTCAATA TCGTCAGTCC CTCTTAGGGT TTACTTGGGC ATTTTTACCT
CCAATTGTTA CAGCAGCCGG AATGGTGATG GCTAAACAAT CCCAAGTGAT TAGTATTGGC
GCAACCGATT TACCCTATCC CGCTTATGTC ATGTTTAGTA TGGCGTTATG GCAGACGTTT
GTGGAGTCTT TAAATGGCCC TGTTATTGCC GTTACTCAAG CCAAGCAAAT GTTAGCTAAA
ATCAATTTCC CCCGTGAAGC GATTATTATT TCTCAAATTG GGCAAGTTTT TTTTAATTTT
AGTATTAAAC TAATCCTGAT TATTGGTTTA TTTATTTGGT TTAGAATCCC TATAACACCA
AGCATTATTG TCGCTCCTGT TGCTTTAATT CATTTAATTT TTTTAGGAAC TGCTATTGGT
TTATTAATTG CGCCTTTTGG TACACTATAT CAAGACTTAT CGAAAGGACT AACCTTAGCG
ACAGGGTTTT GGTTATTTTT AACCCCTGTC ATTTTCCCAG TACCGAGTCG AGAGGGTTTA
TTTGGAACAT TAGTTAATCT TAACCCTGTC ACTCCTCTAT TAGTAACAAC TAGGGAGTTA
GCAACAACTG GAATAATATC TAATCCCCAA GGGTTCTGGA TAGCGAGCGG ACTTGCTATA
ATAGGGTTAT TATTGGTATG GATTGTTTAC CGTCTAGCGA TGCCTTTTGT GATTGAGAGG
ATGAGTGCTT AA
 
Protein sequence
MGQSLIKHTP ESQLRHPRQL FKQMLVDLLA SRELAWQLLI RDLRAQYRQS LLGFTWAFLP 
PIVTAAGMVM AKQSQVISIG ATDLPYPAYV MFSMALWQTF VESLNGPVIA VTQAKQMLAK
INFPREAIII SQIGQVFFNF SIKLILIIGL FIWFRIPITP SIIVAPVALI HLIFLGTAIG
LLIAPFGTLY QDLSKGLTLA TGFWLFLTPV IFPVPSREGL FGTLVNLNPV TPLLVTTREL
ATTGIISNPQ GFWIASGLAI IGLLLVWIVY RLAMPFVIER MSA