| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_3838 |
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| Symbol | |
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| ID | 7105046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8801 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011726 |
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| Strand | - |
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| Start bp | 4017521 |
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| End bp | 4019212 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643476843 |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_002373944 |
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| Protein GI | 218248573 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAT TCCGCAACAT TCTTGTCGGT TTTTGTCTTG CTTTGTTCCT TGTACTGGGT
TTTTCGATAA CGGGATACGC TCGACAACAA ACCCCGAATC CTAGCCCGTC ACCACAGACT
ACCCTAGAAA CCCTTGGGGA AGGTTTTCCC GTAATCCTAG ACGGTTATAC CCTTTTTCAA
GTACATCATG GGACTGGTTC GTTGAACGCG GAAGAGAGAG CGCGCGCTCT CTCGCGACGG
ATCGAGAGAA TTGCCTCGGA TGACAGTCTT TCTCCGAATG ATCTGACGAT TCGAGTTGAT
CCGGCCGATA ACTCCCCCTC GATTATTTTA GGGGATAAGG TGATCCTCAC CGTTACCCCC
CAAGATGCCA AACTGTATCA GGAAACCCAG ACAAAAATCG CAAACCGCGC GCTAGGGGAA
GTGAAAACCG CGATCGAACG CTACCGGATC GCTCGTCAAG CCGATCATTT ATTACGGGGC
GCGATCCACA CAGCGATCGC CACGGGGGTG TTATACCTAT TGATCACCGC GATTCTATTC
CTATCGGGGC GAATTTTTCC CGCGATCCGA CGAACGATCA TCTCCCTAGT TCCGGGATGG
CGGATTCAGA ATTTTGAAAT CCTGTCACCG GAGAAAATCG GGAATATTGT GCTGCAGATT
CTGAAATTCC TTCGCCTTCT GGTAATTTTA ACCTTAGTGT GTTTCTATTT AACTTTCGTA
CTACGGTTAT TCCCGTGGAC GAGACAATTC GGCGATAACT TTCTCACGAC TTTTCTCAAT
ACGCTGGATC TGGTCGCTAA ACAGATCGCC ATTTATCTGC CGAATCTTCT CGTCGTCGCT
ATCATCACCG CGATCACCTA CTATGTTCTG AAAACGATCC GACCGTTTTT TACGGCGATC
GAGCGGGGAA ATCTGAGATT TCAGGGGTTT TATCCCGATT GGGCGCAACC GACCTATTTT
ATTTTAAAGT TCCTCATTAT CGCGCTGGCC GCGGTACTCG CGTTTCCCTA CCTGCCGGGG
TTTGATTCTC CCGCGTTTCA AGGAGTATCG GTCTTTTTAG GCATTTTATT CTCCCTCGGT
TCTACTTCGG TGATCGCCAA TATCGTCGGG GGAGTGATTT TAATCTATAC CCGCGCGTTT
CAACTGCGGG ATGTTATCTC GATTGGCGAT GTGACGGGAG ACGTGATCGA GAAAACCTTA
TTAGTTACGC GAATTCGCAC CCCCACGAAT CGCATCGTTA CAATTCCCAA TTCGGCTCTT
TTAAATACGA ATGTCGTTAA TTTTAGCGTC TCCCAGAGGG AATTTGATCG CCCTCTCATC
CTACAAACCA CAATCACGTT AGGCTACGAT CTACCCTGGC GAAAAGTTCA CGCCGTCCTC
ATCGAAGCGG CCTTAAAAAC CGAACATATC CTCCGCGATC CCGCGCCTTT CGTCCTACAA
GCGAGTCTCG ATGATTTCTC GGTGGCTTAT CAGGTGAACG CTTATACCGA TCACCCGCAA
TTATTTCCGA TTATCTATTC GGAACTACAC CAGAATATGC AGGATAAATG TAACGAAGCG
GGAATCGAAA TTCTCTCTCC CAATTATTTC GCCCTTCGTG ATGGTAATCA TTCAACCATG
CCCGAAAATT ATCTCCCAAC GGATTATCAA ACGCCGACCT TTGGCATTAA TTCGGGGAAT
CCGAACGGAT AA
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| Protein sequence | MKRFRNILVG FCLALFLVLG FSITGYARQQ TPNPSPSPQT TLETLGEGFP VILDGYTLFQ
VHHGTGSLNA EERARALSRR IERIASDDSL SPNDLTIRVD PADNSPSIIL GDKVILTVTP
QDAKLYQETQ TKIANRALGE VKTAIERYRI ARQADHLLRG AIHTAIATGV LYLLITAILF
LSGRIFPAIR RTIISLVPGW RIQNFEILSP EKIGNIVLQI LKFLRLLVIL TLVCFYLTFV
LRLFPWTRQF GDNFLTTFLN TLDLVAKQIA IYLPNLLVVA IITAITYYVL KTIRPFFTAI
ERGNLRFQGF YPDWAQPTYF ILKFLIIALA AVLAFPYLPG FDSPAFQGVS VFLGILFSLG
STSVIANIVG GVILIYTRAF QLRDVISIGD VTGDVIEKTL LVTRIRTPTN RIVTIPNSAL
LNTNVVNFSV SQREFDRPLI LQTTITLGYD LPWRKVHAVL IEAALKTEHI LRDPAPFVLQ
ASLDDFSVAY QVNAYTDHPQ LFPIIYSELH QNMQDKCNEA GIEILSPNYF ALRDGNHSTM
PENYLPTDYQ TPTFGINSGN PNG
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