| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_3807 |
|---|
| Symbol | |
|---|
| ID | 7102106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 3991997 |
|---|
| End bp | 3993367 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643476812 |
|---|
| Product | OpcA protein |
|---|
| Protein accession | YP_002373913 |
|---|
| Protein GI | 218248542 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3429] Glucose-6-P dehydrogenase subunit |
|---|
| TIGRFAM ID | [TIGR00534] opcA protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTC AAACCCCCCC TATCGTTTCT TTGCAAGACC CCAAGGATGT CTCTATTGAT
GTCATTGAGG CAGAATTACG CGCTATATGG CAAAATTACA GTAACAATGA AGATGGTATT
GCGGCCACCC GTGCTACAAC CTTTACCTTT ATTGTCTACG AACCCGAACC GACCCAATAT
CTCTTAGCCG TGTTAGGCTT CTATACCGGT CCCGTCGATG GTATTGCTGG ACCGCGTACC
ACGGCTGCCA TTAAATCAGC CCAAAAAGCC TATAATCTCG AAATTACGGG CAAATCTAAC
GAAGCTTTTA TTACAACCTT ACAGGCCGAA TTTGAGAAAG CCAAAGCAGA AGGTCAATTA
ACCGATGCTC AACAACTGCT GGCAAAAGCC TATTCTCCTG ACCTAGAAGG GACTGGAGTG
GCTGATAGTA TCGCAGCTTC TAACCCTTGC CGTATTATTA CCCTGTGTCC GACTATCGGG
GAAGATGAAG GGGTTAAGGC GCAGGTATCG GCCTATTGTC CCATTAATAA GCGCAGTCAT
AATGCTTTGA TTTGTTGCGA ATACATTACC CTACGGGGAA CAGCCGCCGC GTTAGAACGA
ATTGGTGGCA TTATCTCCGA ATTGGTGATT ACTGGACTAC CGACTTTTGT TTGGTGGAAA
GCCAGTCCTC AACCCGAATA TGGACTGTTT AAACGCTTAG CCTCCCAAGG GGATACGGTT
ATTATTGATT CTAGTACCTT TAGCAGTCCT CAAGAAAACC TGTTAGAAAT CGGTCAGATG
GTTGAGCAGA AAATTCCCCT AGCGGACTTA AACTGGGCAA GAATTGGACC TTGGCAAGAG
TTAACCGCAG CCGCGTTTGA CCCCCCAGAA CGCCGCAGTG CGGTGCTAGA GGTAGACCGT
GTTACCATTG ATTATGAACG GGGCAATGCT TCCCAAGCGT TCATGTATTT GGGATGGGTA
GCCAGTCGTC TGCAATGGCG ACCTGTTGCC TATGAGTATG AGGGTGGAGA CTACGATATT
CGTCGGGTTA AGTTCCTCAA TAATGAACAA AAGACCATTG AAGCAGAGTT AGCAGGGGTT
CCTTTGGCAG ACTGGGGAGA CGTTTTAGGC GACTTAATTA GTCTTAAGTT GAGTTCGACT
AACCTCCAAG CTGACTGTTG TACCGTGTTG TGCTCAGGAA CCACTGGATG TATGCGAATG
GAAGCATCAG GAGGAGCCCA AGCTTGTCGT ATTGAACAAG TGACCTCTTT AGCCGATCAA
AATACGGAAT ACTTATTAGG AAGACAACTG CAACGGTGGG GCACTGATGC GCTTTATGAG
GAGAGTTTGA AGGTGACTAT GGCTATCCTT AAATTAGCCA GTAATGACTA A
|
|---|
| Protein sequence | MTTQTPPIVS LQDPKDVSID VIEAELRAIW QNYSNNEDGI AATRATTFTF IVYEPEPTQY
LLAVLGFYTG PVDGIAGPRT TAAIKSAQKA YNLEITGKSN EAFITTLQAE FEKAKAEGQL
TDAQQLLAKA YSPDLEGTGV ADSIAASNPC RIITLCPTIG EDEGVKAQVS AYCPINKRSH
NALICCEYIT LRGTAAALER IGGIISELVI TGLPTFVWWK ASPQPEYGLF KRLASQGDTV
IIDSSTFSSP QENLLEIGQM VEQKIPLADL NWARIGPWQE LTAAAFDPPE RRSAVLEVDR
VTIDYERGNA SQAFMYLGWV ASRLQWRPVA YEYEGGDYDI RRVKFLNNEQ KTIEAELAGV
PLADWGDVLG DLISLKLSST NLQADCCTVL CSGTTGCMRM EASGGAQACR IEQVTSLADQ
NTEYLLGRQL QRWGTDALYE ESLKVTMAIL KLASND
|
|---|
| |