Gene PCC8801_3551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3551 
Symbol 
ID7102648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp3699020 
End bp3699937 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content41% 
IMG OID643476562 
Producthistone deacetylase superfamily 
Protein accessionYP_002373671 
Protein GI218248300 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCGC CGATTGTTTA CCATCCCCAA TATGTTGCTC CTATCCCTGA TGAGCATCGC 
TTTCCGATGC TCAAATTTCG ACTACTTTAT GAACTATTAT TATCTGATAG TATTGCTGAA 
CCTAAAAATA TTTATACCCC AGAATTTCCA GAATTAGGTT TAATTGAATT AGTGCATACA 
GCCGAATATA TTAATGCTTA TTGTCAGGGA ACTCTCGATG TAAAATCTCA AAGACGTATC 
GGTTTACCCT GGAGTCAAGA ATTAGTTCAA CGGACGTTAA TTGCGGTAGG TGGGACAATT 
TTAACAGCAA AATTAGCCCT ACAATATGGC TTAGCGAGTA ATACCGCCGG GGGAACTCAT 
CACGCTTTTC CTAATTATGG CTCGGGGTTT TGTATTTTTA ATGATTTAGC GATCGCCTCT 
CGTGTGTTAC AACAATTAGG CTTAGTTAAA AAGGTTCTAA TTGTCGATCT CGATGTCCAT 
CAGGGGGATG GAACGGCTGT CATTTTTGAA AATGATCCGA CTGTGTTTAC ATTTTCTCTC 
CATTGTGAGA GTAATTTTCC TGCGAAGAAA CAACAAAGCG ATCTCGATGT TCCTCTACCT 
GAAGGGTTAG ATGATGACGG TTATCTGCAA ATTTTAGCGC AATATTTACC CGATTTATTG 
TCTCATGTTA AACCCGATTT AGTCCTATAT GATGCGGGAG TCGATACCCA TGTTAGCGAT 
CGCTTAGGAA AACTCGCTTT GACGGATAGG GGGTTATACC GTCGAGAAAT GCAGGTATTA 
AGTACTTGTG TGGCCGCAGG GTATCCAGTG GCTAGTGTTA TTGGAGGCGG TTATACTAAA 
GATCTAAAGA AACTGGTATA TCGACATTCT TTGCTCCATC GCGCTTCACG GGATGTTTAT 
CAACAATACC GTCCTTAG
 
Protein sequence
MNPPIVYHPQ YVAPIPDEHR FPMLKFRLLY ELLLSDSIAE PKNIYTPEFP ELGLIELVHT 
AEYINAYCQG TLDVKSQRRI GLPWSQELVQ RTLIAVGGTI LTAKLALQYG LASNTAGGTH 
HAFPNYGSGF CIFNDLAIAS RVLQQLGLVK KVLIVDLDVH QGDGTAVIFE NDPTVFTFSL 
HCESNFPAKK QQSDLDVPLP EGLDDDGYLQ ILAQYLPDLL SHVKPDLVLY DAGVDTHVSD 
RLGKLALTDR GLYRREMQVL STCVAAGYPV ASVIGGGYTK DLKKLVYRHS LLHRASRDVY 
QQYRP