Gene PCC8801_3549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3549 
Symbol 
ID7102646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp3697639 
End bp3698172 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content35% 
IMG OID643476560 
Producttype 4 prepilin-like protein 
Protein accessionYP_002373669 
Protein GI218248298 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4969] Tfp pilus assembly protein, major pilin PilA 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCGGT TTAATGGATT GTATCTAGCT TATTTGATCA GTTTATCAAA ACACTCCCAT 
AAACTGACTA AAAATCCTAA TAATGGGTTT ACCTTGCTAG AATTATTAAT AAGTGTTGTA 
ATTATTGGGG TTCTAGCTGC TATTGCTATT CCTTCCTATG TAGCAATAGT GGATAATGCT 
CGTTATGCCG AAGCCAAAAT TCAAATGGGG TGTTTAAAGG GGGAATTAGA AGGGTATAGA 
ATCGAATACG GATATTTTCC CGATGATGTC AATAATAATA CAGTTCCTAC CGGGATAGAA 
TGTTTTTATC GCCAAAATAG TATGCAAGTT CCTTTTAATT CAAGATATGA TTATGAAAAT 
TGGTCAGTGT CTGGGGGATG TGTTATTCAA ATTACGTTTT TTGGAAAAAA TGGGGTACGA 
AATACCCTCG CTAATACGAA TGCTTATCAA GCACCCGGTT TTCATAAATT TACGACTAAT 
GATGATTTAA TCTTAAGCCT TGGGGTTCAA GAGCCTTCAG TTTGTAGCTC TTGA
 
Protein sequence
MSRFNGLYLA YLISLSKHSH KLTKNPNNGF TLLELLISVV IIGVLAAIAI PSYVAIVDNA 
RYAEAKIQMG CLKGELEGYR IEYGYFPDDV NNNTVPTGIE CFYRQNSMQV PFNSRYDYEN 
WSVSGGCVIQ ITFFGKNGVR NTLANTNAYQ APGFHKFTTN DDLILSLGVQ EPSVCSS