Gene PCC8801_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3542 
SymbolmnmA 
ID7102640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp3693637 
End bp3694686 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content42% 
IMG OID643476554 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_002373663 
Protein GI218248292 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG TTGTTGTCGG TTTGTCAGGA GGGGTTGATA GTTCCGTTGC TGCTGCTGTT 
TTGCATCATC AAGGCTATGA AGTCATTGGG TTAACCCTAT GGTTGATGAA AGGGAAGGGA 
CAATGCTGTT CTGAAGGGAT GGTAGATGCG GCCTTTATTT GCGAACAATT GGGCATTCCT 
CATCACATTG TCGATAGTCG AGACGTATTT CAAGCCAATA TCGTTAATTA TTTAGTGTCA 
GGCTATGAAG CGGGTATTAC CCCCCTTCCT TGTTCCCAAT GTAATCGGGC GGTGAAATTT 
GGTCCGATGT TGAATTATGC TAGACAAGAG TTAGGGTGCG ATCGCATTGC CACTGGACAT 
TATGCCCGCA TTCGTTACGA TGAAATAAGC CAACGCTATC AATTATTACG CGCCATTGAT 
CGCAATAAAG ATCAGTCCTA TTTTCTCTAT GATCTCTCCC AAGAAATGTT AGCCGGAACG 
GTGTTTCCTT TAGGGGATCA AACCAAAGAA GACACCCGAC GCATTGCTGC GGAATTTGAC 
TTAAAAACCG CCAGTAAACC AGAAAGTCAA GATTTATGTT TAATTGAAGC CCACGGTTCG 
ATGAAGACGT TTCTTGACCA ATATATTCAT CAAAAAGAAG GCGATATTGT CGATCTTGAA 
GGGAAGGTTT TAGGCAAACA TCAAGGGATT CATCATTATA CCATTGGACA GCGCAAAGGT 
TTAGGTGTTG CTGCTCCTGA GCCTTTATAT GTGGTAAAAC TTGATCCGAT TATGAATCAA 
GTTATTGTAG CAAATCGGGC TAATGCGGGA CGATCTGATT GTACCGTAAC CCGTTTGAAT 
TGGGTATCTA TTGCTGCACC GTCTACTCCA ATACGAGTAG AAACCCAAAT TCGCTATCGT 
TCTTCTGCGG TTCCCGTTGA TTTAATCCCT TTAGAAGATA ATCGAGTTAA ATTAGTCTTT 
GATGAACCAG AATTTGGCAT TACCCCAGGC CAAGCGGCAG TTTTCTATGA TGGAGAAATC 
CTATTAGGAG GGGGAATTAT TGAACTATAA
 
Protein sequence
MNKVVVGLSG GVDSSVAAAV LHHQGYEVIG LTLWLMKGKG QCCSEGMVDA AFICEQLGIP 
HHIVDSRDVF QANIVNYLVS GYEAGITPLP CSQCNRAVKF GPMLNYARQE LGCDRIATGH 
YARIRYDEIS QRYQLLRAID RNKDQSYFLY DLSQEMLAGT VFPLGDQTKE DTRRIAAEFD 
LKTASKPESQ DLCLIEAHGS MKTFLDQYIH QKEGDIVDLE GKVLGKHQGI HHYTIGQRKG 
LGVAAPEPLY VVKLDPIMNQ VIVANRANAG RSDCTVTRLN WVSIAAPSTP IRVETQIRYR 
SSAVPVDLIP LEDNRVKLVF DEPEFGITPG QAAVFYDGEI LLGGGIIEL