Gene PCC8801_3457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3457 
Symbol 
ID7103142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp3607780 
End bp3610992 
Gene Length3213 bp 
Protein Length1070 aa 
Translation table11 
GC content44% 
IMG OID643476472 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002373581 
Protein GI218248210 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGAG TTAATGAAAC TGAATGGCGT GCCATAGTCA ATCTCACGGG GGTGGGGATA 
GCTCAAGCTG ATCTCCAAAC TGGACGGTTT TTGCAGGTTA ATCCCGCTTT TTGTCGGTTA
ACAGGCTATA CGGAAGCCGA ATTACTCACC CTGACCATAG ACGATCTTAA CCATCCCGAT
GACCGTATCT TTGATCAACA ACGTAACCTC AATCTTTTAC AAAGAGGCAG TTATCAGTCA
GAAAAACGCT ATCAACGCAA AGACGGCAGC ACCGTCTGGG TACTAGCAAC AGGCGATATT
ATTCAGGATG CGCAGGGGCA ACCGATTCAG GCTTTTGTGA TGGTTCAGGA CATTAGCGAT
ATGAAGCAGC GCAAAGCGGA ACCCCAACAA CTCGAACTGT TCTTGCAAAC CTCCGAAGCC
AAACTCAGCC GTATTTTAAA TAGTGCGATC GCTGCCATTT CCAGTTTTCG GATCTATGCT
AACCGAGACT GGGAATACGA CTATTGGTCG GCAGGATGCG AAAAAATCTA TGGTTATCCC
CTCGAAGTCT ATCAAGATAA ATATTTTTGG CTATCTCAGG TAGTCCCAGA GGATTGTGAG
CAGAAGATAA TCCCCCTGTT TGAGGATTTC TTTGCCGAAC GCGATGCCAC AGTTGAGTAT
CGTTTTCGTC ATCAAGATGG CTCAATTCGT TGGTTCTCCA GTTCCTACTC GTCTCAAAAA
ATCACCGAGG ATTGTTGGAT CGTCACAACG GTTAATTATG ATATTACTAC TCGCAAACAA
GCAGAAATTG ACCTAGAAAA AACTCAAAAG CGACTTCAAC AGCAATTAGC AGAAATCGAA
ACCATTTACC AATCAGCCCC CATCGGACTC TGTGTTTTAG ATACCAATCT ACGCTTTGTT
CGGATCAACC AACGACTAGC CGAAATCAAC GGACTTCCCG TTGAAGCTCA TCTCGGTCGA
ACCGTTAGGG AAGTGCTTCC CCAACTTGCT GATACAGCCG AACAGATCTT AGGGCAGATT
TTGACCACCG GGGAACCCCT GTTGAATGTG GAAATTACAG GAGAAACCCC GGCCTATCCT
GACGTGCAAA GAACCTGGTT AGAAAACTTT TGGCCGCTCA AAGATCGCGA TCGCATCATT
GGCATCAGTA CGCTTTGTCA GGAGATTACC GAGCGCAAAC AAGCAGAACT GGCCTTAAAT
CAGCAAATAG CTAAAGAACG TCTGCTCCTT GAAATTACCC AAGCCATTTA CCAAACCCTC
GATGTCCGCC AAATTTTACA AACCGCCGTC GCTCAGGTAC AACGATGTTG GGACACCGAT
CGCGTTATTA TTTTTCAATT TGATCCCGAT GGGTCAGGGA CGGTGGTTGC TGAATCGGTA
AAAGCCGATT ATCCTGCGAT TTTGGGGTCG GAGATTCATG ATCCTTGTTT TGAGAAGCAC
TACATAGAAC CCTATCGTCA GGGGCGAGTC TCAGCGATCG CTGACTTTCT GACGGCTCAA
GTAGAACCTT GCTATCAAGA GTTCATGGCT CAATTTCAGG TTAGAGGCAA TCTTGTCGTC
CCCATTTTAC AACGGGAACA GTTGTGGGGT TTATTGATCG CCCATCAGTG CAGTGCTCCC
CGACAGTGGC AACCCTCGGA AATTGAACTC CTACAACAAG TAGCTCTTCA GTTGGGTATT
GCCATTCAAC AAGCGAAACT CTACGAAAAA AATGCCGAAC AGGCGGCCTT CATCGATGTT
GCTAGTGATG GCATTTTTGT TCAAGACTTG ACTAGCCGTA TTTTATTCTG GAGCCAAGGA
GCAGAACGCT TGTATGGTTG GACAGCCCAA GAGGCTATCG GTAAAATGGC TGCTGAACTC
TTGCTTCAGG ACTCTGTGTC TGAACTAGAA AGTTCTCTCC AGATGACCCT CAAACAAGGA
TATTGGAGAG GGGAACTACA CCACCTAACC CAAGAGAAGG CAGAAATCAT CGTCGAAAGT
CGCTGGACAT TAATGCGCGA TGCTCAGGGC AATCCTATCT CAATTTTGAC AGTTAATACC
GATATTACCG AGAAAAAACT CTTAGAAAAG CAATTATTCC ACGCTCAACG CCTAGAGAGT
ATTGGGACAT TGGCCAGTGG CATCGCCCAC GACCTCAATA ATATTTTGAC TCCTTTGCTC
AGTATTTCCC AACTGTTACA ACTAAAATAT TCTAATTTGG ATGAATCAAC CTTACGACTC
CTGCAAATTC TGACAATCAA TACCCAACGC GCGGCAAATA TCGTTAAGCA ATTGCTCTTG
TTTTCCTCCT CCACTGAAAC GGAATTTAGC TTAATCTCGC CATCTCAACT CCTAGAAGAC
GTTTTCAAAT TCTTAGGAGA AACCTTCCCC AAATCTATTG AGATTGAAGT CGGAATTTCT
CCTGATTTGT GGCTGATTAA TGGTGATCCT ACCCAACTTT ATCAAGTTTT GATGAACCTT
TGTGTTAATG CACGCGATGC AATGCCTGAT GGGGGTCAAC TAACCATCTC TGCCCAAAAT
ATTAACATTG ATCAACAATA TTCCTATACC AATCACCAGA TCAAAGTCGG GCAATACGTT
GTCATTACCA TCAAAGATAC GGGAAGGGGC ATTCCTCGAG AAATCCTTGA CCGCATTTTC
GATCCCTTTT TTACCACAAA ACCCTTGAGT CAAGGAACAG GGTTAGGACT TTCTACCGCC
TTGGGCATTA TCAAAAATCA TGGTGGTACT ATCGAAGTGT ACAGCGATCC CAACAACAGC
AGGGGTACTC AATTTAACAT TTATTTACCG ATCAGCGAGA CGATCGCTGT TTCTGAAACT
ACGACGGGTC AGGTTATTCC CTCTGGACAG CAAGAATTAA TCTTAGTTGT GGATGATGAA
GTCTCGATAG GAGAAATTAC GAAAACTACC TTAGAAACCT ATAATTATCG AGCGATCGCG
GTTGATAATA GCATTGATGC TATCGCTTAT TATGCCCAAC ACTATCAAGA GATTCAAATT
GTTTTGATAG ATTTGCTCAT GCCAGAAATC GATGGATTAA CCATCATGCG GGCTTTAAAA
AGAATTAATC CTGATGTTAA GCTCATTGTG ACAACTGGAC TCACAACCCC AGAAAACAGT
AAAGCCGCTC AATCCCTCGG AATCAAAGGG TTTTTGCCCA AACCCTACAC AGCCGAAACG
TTATTATTGA TGATGGCAAA AGTTGTAAGC TAA
 
Protein sequence
MLRVNETEWR AIVNLTGVGI AQADLQTGRF LQVNPAFCRL TGYTEAELLT LTIDDLNHPD 
DRIFDQQRNL NLLQRGSYQS EKRYQRKDGS TVWVLATGDI IQDAQGQPIQ AFVMVQDISD
MKQRKAEPQQ LELFLQTSEA KLSRILNSAI AAISSFRIYA NRDWEYDYWS AGCEKIYGYP
LEVYQDKYFW LSQVVPEDCE QKIIPLFEDF FAERDATVEY RFRHQDGSIR WFSSSYSSQK
ITEDCWIVTT VNYDITTRKQ AEIDLEKTQK RLQQQLAEIE TIYQSAPIGL CVLDTNLRFV
RINQRLAEIN GLPVEAHLGR TVREVLPQLA DTAEQILGQI LTTGEPLLNV EITGETPAYP
DVQRTWLENF WPLKDRDRII GISTLCQEIT ERKQAELALN QQIAKERLLL EITQAIYQTL
DVRQILQTAV AQVQRCWDTD RVIIFQFDPD GSGTVVAESV KADYPAILGS EIHDPCFEKH
YIEPYRQGRV SAIADFLTAQ VEPCYQEFMA QFQVRGNLVV PILQREQLWG LLIAHQCSAP
RQWQPSEIEL LQQVALQLGI AIQQAKLYEK NAEQAAFIDV ASDGIFVQDL TSRILFWSQG
AERLYGWTAQ EAIGKMAAEL LLQDSVSELE SSLQMTLKQG YWRGELHHLT QEKAEIIVES
RWTLMRDAQG NPISILTVNT DITEKKLLEK QLFHAQRLES IGTLASGIAH DLNNILTPLL
SISQLLQLKY SNLDESTLRL LQILTINTQR AANIVKQLLL FSSSTETEFS LISPSQLLED
VFKFLGETFP KSIEIEVGIS PDLWLINGDP TQLYQVLMNL CVNARDAMPD GGQLTISAQN
INIDQQYSYT NHQIKVGQYV VITIKDTGRG IPREILDRIF DPFFTTKPLS QGTGLGLSTA
LGIIKNHGGT IEVYSDPNNS RGTQFNIYLP ISETIAVSET TTGQVIPSGQ QELILVVDDE
VSIGEITKTT LETYNYRAIA VDNSIDAIAY YAQHYQEIQI VLIDLLMPEI DGLTIMRALK
RINPDVKLIV TTGLTTPENS KAAQSLGIKG FLPKPYTAET LLLMMAKVVS