| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_3418 |
|---|
| Symbol | |
|---|
| ID | 7103114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 3564742 |
|---|
| End bp | 3566766 |
|---|
| Gene Length | 2025 bp |
|---|
| Protein Length | 674 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643476433 |
|---|
| Product | DNA ligase, NAD-dependent |
|---|
| Protein accession | YP_002373542 |
|---|
| Protein GI | 218248171 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
|---|
| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAATAG CGACCCCAGA AATACAACAA CGAGTCCAAC AACTGCGACA ACAACTGCAA
AAAGCCAACT ATGCTTACTA TGTCCTTGAT AATCCCATTA TGGAGGATTC CGTTTATGAT
CAATTGTATC GAGAACTTCA AGATCTAGAA AGTCAATATC CCATCTTAAT TACCCCTGAT
AGTCCTACCC AACGAGTGGG AGATCAACCC GCCGCTCAAT TTAATTCTAT TCGTCATAAT
ATTCCCCTTT ATAGCCTCGA AAATGCCTTT AATTTGCAGG AATTACAAAA ATGGGAAGAA
CGTTGGCAAC GATACGATCA AGTCAGCAAT AGTGACTATG TTTGTGAATT AAAAATTGAT
GGATCAGCCT TAGCCTTAAC CTACGAGGAT GGAATCTTAA TTAGAGGGGT GACTAGGGGA
GATGGAATCA CCGGAGAAGA AATCACCCAA AATGTCAGAA CGATTCGGTC TATTCCCCTC
AAATTAACCT TAGAAAATCC TCCTTCAAGG GTTGAAATTC GGGGCGAAGC GTTCTTACCT
CTCAATGAAT TTGATCGCCT CAATGGAGAA CGGAAACAAG CAGGAGAACC CCTCTTTGCT
AACCCTCGCA ATGCAGCCGC CGGAACCCTA AGACAATTAG ATTCCAAAGT GGTTAGTGAA
CGACGCTTAC AATTTTTTGC CTATACCCTA CATCTCCCTG AAGACAACAG TCTAAGCAGT
CAATGGGAGT CCTTAGAATG GTTAAAAAAA ATGGGGTTTT TAGTCAATCC AAACTGTCAA
TTATGCCCTA CTTTAGAAGC CGTCGCGGAC TATTTTCGCC ATTGGGAAAC CGCGAGACAC
GACCTACCCT ACATGACCGA TGGAGTGGTG GTTAAAATTA ATGATTATGC CCTACAAAAT
CAACTCGGGT TTACTCAAAA ATTCCCTCGA TGGGCGATCG CACTCAAATA TCCCGCCGAA
GAAGCCCCCA CGCGGGTTAA AGAGATCATC GTCAACGTCG GAAGAACTGG CGCAGTCACC
CCCATGGCTA TCATGGAACC TGTCCACCTA GGGGGAACTA TCGTCCAACG GGCAACCCTG
CATAATAGCG ATCGCGTCTC GGAATTGGAC ATCCGGGTGG GAGATACGGT CATTATTCGC
AAAGCGGGCG AAATTATCCC CGAAGTTCTG CGGGTTTTGC CTGAATTACG CCTTCCCAAT
AGCCGACCCT ATCAAATGCC TAGTCATTGT CCTGAATGCG GATCAACTCT GGTTCGTCCC
GTGGGGGAAG CGGTGACACG ATGTGTTAAT AGTTCTTGTC CCGCTATTTT ACGCGGTAGT
GTCGTTCATT GGGCTTCCCG TGATGCCCTA GATATTCGCG GGTTAGGGGA GAAAATTGTC
AGTTTATTGG TGGAAAATGA GTTAATTACA TCCATCGCTG ATTTATATCA GTTAACCCCC
GAAAAAGTTG CCGCCTTAGA CCGCATGGGA ACGAAATCTG CCCAGAAGTT AATTAATGCC
ATTGAAGGCA GTAAACGGCA GTCCTGGCCA CGGGTTCTCT ATGGGTTAGG TATTCGGTAT
GTGGGCAATG TAACCGCAAA ATTACTAACC GATAATTTTC CTTCAGTTGA GGTGTTATCA
CAAGCTTCTG TCCCTACCTT AGCTTCCGTT TATGGAGTAG GAGAAGAGAT TGCTCAATCG
GTGTTTGATT GGTTTAAAAT TGTAGAAAAT CAGACATTAA TTGAACAATT GAAAATCGCT
GGATTACAAT TAGAAAATAT TGCTTCTCAA GCGGTCAGTT TAACTCCATC ATCAGGAAAC
ATCGCGGGCA AAACATTTGT TTTAACAGGA ACATTACCTA CATTAAAGCG CAATGAAGCT
AAAGCATTAA TTGAGAAAGC AGGAGGCAAA GTAACGGGAT CAATTAGTAG CAAAACTGAT
TATTTAGTTG TGGGAGAAGA AGCCGGATCA AAATTAGCCA AGGCTCAAGA ATTAGGGATT
ACTCAACTCA GTGAAGCAGA CTTATTAAAA TTCCTAACAA ATTAA
|
|---|
| Protein sequence | MTIATPEIQQ RVQQLRQQLQ KANYAYYVLD NPIMEDSVYD QLYRELQDLE SQYPILITPD
SPTQRVGDQP AAQFNSIRHN IPLYSLENAF NLQELQKWEE RWQRYDQVSN SDYVCELKID
GSALALTYED GILIRGVTRG DGITGEEITQ NVRTIRSIPL KLTLENPPSR VEIRGEAFLP
LNEFDRLNGE RKQAGEPLFA NPRNAAAGTL RQLDSKVVSE RRLQFFAYTL HLPEDNSLSS
QWESLEWLKK MGFLVNPNCQ LCPTLEAVAD YFRHWETARH DLPYMTDGVV VKINDYALQN
QLGFTQKFPR WAIALKYPAE EAPTRVKEII VNVGRTGAVT PMAIMEPVHL GGTIVQRATL
HNSDRVSELD IRVGDTVIIR KAGEIIPEVL RVLPELRLPN SRPYQMPSHC PECGSTLVRP
VGEAVTRCVN SSCPAILRGS VVHWASRDAL DIRGLGEKIV SLLVENELIT SIADLYQLTP
EKVAALDRMG TKSAQKLINA IEGSKRQSWP RVLYGLGIRY VGNVTAKLLT DNFPSVEVLS
QASVPTLASV YGVGEEIAQS VFDWFKIVEN QTLIEQLKIA GLQLENIASQ AVSLTPSSGN
IAGKTFVLTG TLPTLKRNEA KALIEKAGGK VTGSISSKTD YLVVGEEAGS KLAKAQELGI
TQLSEADLLK FLTN
|
|---|
| |