Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_3418 |
Symbol | |
ID | 7103114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | + |
Start bp | 3564742 |
End bp | 3566766 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643476433 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_002373542 |
Protein GI | 218248171 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAATAG CGACCCCAGA AATACAACAA CGAGTCCAAC AACTGCGACA ACAACTGCAA AAAGCCAACT ATGCTTACTA TGTCCTTGAT AATCCCATTA TGGAGGATTC CGTTTATGAT CAATTGTATC GAGAACTTCA AGATCTAGAA AGTCAATATC CCATCTTAAT TACCCCTGAT AGTCCTACCC AACGAGTGGG AGATCAACCC GCCGCTCAAT TTAATTCTAT TCGTCATAAT ATTCCCCTTT ATAGCCTCGA AAATGCCTTT AATTTGCAGG AATTACAAAA ATGGGAAGAA CGTTGGCAAC GATACGATCA AGTCAGCAAT AGTGACTATG TTTGTGAATT AAAAATTGAT GGATCAGCCT TAGCCTTAAC CTACGAGGAT GGAATCTTAA TTAGAGGGGT GACTAGGGGA GATGGAATCA CCGGAGAAGA AATCACCCAA AATGTCAGAA CGATTCGGTC TATTCCCCTC AAATTAACCT TAGAAAATCC TCCTTCAAGG GTTGAAATTC GGGGCGAAGC GTTCTTACCT CTCAATGAAT TTGATCGCCT CAATGGAGAA CGGAAACAAG CAGGAGAACC CCTCTTTGCT AACCCTCGCA ATGCAGCCGC CGGAACCCTA AGACAATTAG ATTCCAAAGT GGTTAGTGAA CGACGCTTAC AATTTTTTGC CTATACCCTA CATCTCCCTG AAGACAACAG TCTAAGCAGT CAATGGGAGT CCTTAGAATG GTTAAAAAAA ATGGGGTTTT TAGTCAATCC AAACTGTCAA TTATGCCCTA CTTTAGAAGC CGTCGCGGAC TATTTTCGCC ATTGGGAAAC CGCGAGACAC GACCTACCCT ACATGACCGA TGGAGTGGTG GTTAAAATTA ATGATTATGC CCTACAAAAT CAACTCGGGT TTACTCAAAA ATTCCCTCGA TGGGCGATCG CACTCAAATA TCCCGCCGAA GAAGCCCCCA CGCGGGTTAA AGAGATCATC GTCAACGTCG GAAGAACTGG CGCAGTCACC CCCATGGCTA TCATGGAACC TGTCCACCTA GGGGGAACTA TCGTCCAACG GGCAACCCTG CATAATAGCG ATCGCGTCTC GGAATTGGAC ATCCGGGTGG GAGATACGGT CATTATTCGC AAAGCGGGCG AAATTATCCC CGAAGTTCTG CGGGTTTTGC CTGAATTACG CCTTCCCAAT AGCCGACCCT ATCAAATGCC TAGTCATTGT CCTGAATGCG GATCAACTCT GGTTCGTCCC GTGGGGGAAG CGGTGACACG ATGTGTTAAT AGTTCTTGTC CCGCTATTTT ACGCGGTAGT GTCGTTCATT GGGCTTCCCG TGATGCCCTA GATATTCGCG GGTTAGGGGA GAAAATTGTC AGTTTATTGG TGGAAAATGA GTTAATTACA TCCATCGCTG ATTTATATCA GTTAACCCCC GAAAAAGTTG CCGCCTTAGA CCGCATGGGA ACGAAATCTG CCCAGAAGTT AATTAATGCC ATTGAAGGCA GTAAACGGCA GTCCTGGCCA CGGGTTCTCT ATGGGTTAGG TATTCGGTAT GTGGGCAATG TAACCGCAAA ATTACTAACC GATAATTTTC CTTCAGTTGA GGTGTTATCA CAAGCTTCTG TCCCTACCTT AGCTTCCGTT TATGGAGTAG GAGAAGAGAT TGCTCAATCG GTGTTTGATT GGTTTAAAAT TGTAGAAAAT CAGACATTAA TTGAACAATT GAAAATCGCT GGATTACAAT TAGAAAATAT TGCTTCTCAA GCGGTCAGTT TAACTCCATC ATCAGGAAAC ATCGCGGGCA AAACATTTGT TTTAACAGGA ACATTACCTA CATTAAAGCG CAATGAAGCT AAAGCATTAA TTGAGAAAGC AGGAGGCAAA GTAACGGGAT CAATTAGTAG CAAAACTGAT TATTTAGTTG TGGGAGAAGA AGCCGGATCA AAATTAGCCA AGGCTCAAGA ATTAGGGATT ACTCAACTCA GTGAAGCAGA CTTATTAAAA TTCCTAACAA ATTAA
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Protein sequence | MTIATPEIQQ RVQQLRQQLQ KANYAYYVLD NPIMEDSVYD QLYRELQDLE SQYPILITPD SPTQRVGDQP AAQFNSIRHN IPLYSLENAF NLQELQKWEE RWQRYDQVSN SDYVCELKID GSALALTYED GILIRGVTRG DGITGEEITQ NVRTIRSIPL KLTLENPPSR VEIRGEAFLP LNEFDRLNGE RKQAGEPLFA NPRNAAAGTL RQLDSKVVSE RRLQFFAYTL HLPEDNSLSS QWESLEWLKK MGFLVNPNCQ LCPTLEAVAD YFRHWETARH DLPYMTDGVV VKINDYALQN QLGFTQKFPR WAIALKYPAE EAPTRVKEII VNVGRTGAVT PMAIMEPVHL GGTIVQRATL HNSDRVSELD IRVGDTVIIR KAGEIIPEVL RVLPELRLPN SRPYQMPSHC PECGSTLVRP VGEAVTRCVN SSCPAILRGS VVHWASRDAL DIRGLGEKIV SLLVENELIT SIADLYQLTP EKVAALDRMG TKSAQKLINA IEGSKRQSWP RVLYGLGIRY VGNVTAKLLT DNFPSVEVLS QASVPTLASV YGVGEEIAQS VFDWFKIVEN QTLIEQLKIA GLQLENIASQ AVSLTPSSGN IAGKTFVLTG TLPTLKRNEA KALIEKAGGK VTGSISSKTD YLVVGEEAGS KLAKAQELGI TQLSEADLLK FLTN
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