Gene PCC8801_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3390 
Symbol 
ID7103093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp3536870 
End bp3537370 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content37% 
IMG OID643476405 
ProductTPR repeat-containing protein 
Protein accessionYP_002373514 
Protein GI218248143 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCCT TAATCATCGC GTATTCTTTA TTACTTATTA GCTTACTGGG TTTATTTGAT 
CTCAAAAATG TTAGCTATGG ATCTCAACCG ATTAATCCCT CTTTACGAAC ACAAAGGTTT 
TCCCATGATC CTAACCTCAA TGAATTAATT ATTAGAGGCA TAGAAAAAGG CATTCAGGGA 
GATTATCAAG GAGCGATCGC TGATTTTAAT CAAGTTATTT TAATTAATCC CAATGAAGTA 
GAAGCCTATC ATAGTCGAGG AATCGCCTAT ATAAAACTAG GCAATTATTC CCAAGCGATC 
GCCGACTTTA ATAATGCCTT GGGGTTAAAT CCAAACATTC CTGAAATTTA TCAAGAACGA 
GCTAAAATCC GCTTAATATT AAGTGATAAA GCCGGAGCGA TCGCCGATCT ACAAACAGCC 
GCCGAATTAT TTAAACAACA AGGCAATACC TTTAGTTATC AAGAAACCCA AAAACTGCTC 
AGAGATCTTC AACCGCGATA G
 
Protein sequence
MKPLIIAYSL LLISLLGLFD LKNVSYGSQP INPSLRTQRF SHDPNLNELI IRGIEKGIQG 
DYQGAIADFN QVILINPNEV EAYHSRGIAY IKLGNYSQAI ADFNNALGLN PNIPEIYQER 
AKIRLILSDK AGAIADLQTA AELFKQQGNT FSYQETQKLL RDLQPR