Gene PCC8801_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3288 
Symbol 
ID7105922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp3435422 
End bp3436777 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content41% 
IMG OID643476305 
Product(dimethylallyl)adenosine tRNA methylthiotransferase 
Protein accessionYP_002373415 
Protein GI218248044 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0621] 2-methylthioadenine synthetase 
TIGRFAM ID[TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCCTA AAAAAATGAC CCATTATCAA CGCCACTACC ACATTACAAC CTTTGGCTGT 
CAGATGAATA AAGCTGACTC GGAACGCATG GCGGGTATAT TAGAAAATAT GGGGTTTATT
TGGTCAGAAG ATCCCAATCA AGCCGATTTA ATTCTCTATA ATACCTGTAC CATTCGGGAT
AATGCCGAAC AAAAGGTTTA TTCCTATTTA GGAAGACAGG CAAAACGCAA ACACGAAAAC
CCCGATTTAA CCCTAATTGT AGCGGGTTGT GTGGCACAGC AGGAAGGGGA ACAAATCCTA
AGAAGAGTTC CCGAATTAGA TTTAGTGATG GGACCCCAAC ACGCAAACCG TTTAGAAGAT
CTTTTGCAAC AGGTTTTTGA TGGAAATCAA GTCGTTGCCA CTGAACCTAT TCATATTATT
GAAGATATCA CCAAACCCCG TCGAGATAGT ACCATTACCG CGTGGGTGAA TGTAATTTAT
GGCTGTAACG AACGCTGTAG TTATTGTGTC GTTCCTAACG TTCGAGGGGT AGAACAATCA
AGGACTCCCG AAGCCATTTT AGCCGAGATG GAACTATTAG GAAAGCAAGG TTATAAAGAA
GTTACTTTGC TAGGGCAAAA TATTGATGCC TACGGACGAG ATTTACCTGG CGTAACTGAA
AGCGGAAGAC ATCAACATAC TTTAACGGAT TTATTGTATA CTGTTCACGA TGTTGTAGGG
ATTGAACGGA TTCGTTTTGC CACCAGTCAT CCCCGTTATT TTACTGAACG GCTAATCGCT
GCTTGTCAAG AATTATCCAA AGTTTGCGAA CATTTTCATA TTCCCTTTCA ATCGGGAGAT
AATGACATTT TAAAAGCGAT GAAACGCGGA TACACCCACG AAAAATATCG GCAAATTATC
GATAAAATTC GGGATTATAT GCCGGATGCG TCCATTAGTG CCGATGCTAT TGTGGGATTT
CCTGGGGAAA CGGAAGAACA GTTTGAAAAT ACGTTAAAAT TAGTCGAGGA TATTGGTTTT
GATCAACTCA ATACCGCAGC CTATTCTCCC CGTCCTGGGA CACCTGCGGC ATTATGGGAT
AATCAATTAA GCGAAGAAGT AAAAAGCGAT CGCCTACAAC GATTAAACCA TTTAGTGGCA
CAAAAAGCCG CCGAACGATC GCAACGGTAT TTAGGACGCA TTGAAGAGGT ATTAGTCGAA
GATCAAAACC CCAAAGATTC TACTCAAGTG ATGGGACGAA CCAGAGGAAA TCGTTTGACC
TTTTTTAAAG GGGATATTAA TCAATTAAAG GGTCGATTAA TTAAGGTTAA AATTACTGAG
GTTCGGGCTT TTAGTTTAAC AGGTGAGATA GTTTAA
 
Protein sequence
MTPKKMTHYQ RHYHITTFGC QMNKADSERM AGILENMGFI WSEDPNQADL ILYNTCTIRD 
NAEQKVYSYL GRQAKRKHEN PDLTLIVAGC VAQQEGEQIL RRVPELDLVM GPQHANRLED
LLQQVFDGNQ VVATEPIHII EDITKPRRDS TITAWVNVIY GCNERCSYCV VPNVRGVEQS
RTPEAILAEM ELLGKQGYKE VTLLGQNIDA YGRDLPGVTE SGRHQHTLTD LLYTVHDVVG
IERIRFATSH PRYFTERLIA ACQELSKVCE HFHIPFQSGD NDILKAMKRG YTHEKYRQII
DKIRDYMPDA SISADAIVGF PGETEEQFEN TLKLVEDIGF DQLNTAAYSP RPGTPAALWD
NQLSEEVKSD RLQRLNHLVA QKAAERSQRY LGRIEEVLVE DQNPKDSTQV MGRTRGNRLT
FFKGDINQLK GRLIKVKITE VRAFSLTGEI V