Gene PCC8801_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3176 
Symbol 
ID7103912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp3323066 
End bp3323791 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content40% 
IMG OID643476200 
Productphage shock protein A, PspA 
Protein accessionYP_002373311 
Protein GI218247940 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATGGC TAGGAAGAAT TGGTAAAGTT GTTCAATCGC AGATCAATAC TTTAATTAAA 
GAAGCAGAAG ATCCCGAAAA AGTTCTAGAA AACGCGATCG CAGCCATGGA ACAGGAATTG
ATCGCGATGC GGCGAGCCTT AGCTGAAGCG ATCGCCACTA ATAAAAGTGC TCAACGGCAA
TTCGTACACC ACCAAAAAGC AGCCGACAAA TGGTATGAAC GCGCTCAAAT GGCTTTAGAA
AAGGGCAATG AACCTTTAGC TAGAGAAGCC CTTGTTAACC GTCAAGCTTA TCAAATACAA
GCCCAAAGCA TAGAAAATCA ATTAGCCCAA CAAAACCAGA TTATCGCTAA AGTTAAAGAC
GATTTACGGA ACTTAGAGCA TAAATACAGC CAAGCCAAAA CCCAAAAAAG CCTCTATCTA
GCTAGACTAC GTTCAGCCAT GGCTTCCCAA CGATTACAAG AAGTCATCGG AAATCTTAAC
CCAGGCAATT ATAGCAGCGT TTTTGAGCAA ATAGAAACCA GAATCCTTGA ACTCGAAGCT
CAATCAGAAT TAACCCAAAC TGTTAATGTA GACCCCTTAG AAAAGCAGTT TGCTGCTTTA
GAAAACAACA AAAATATTGA TGAGCAATTA GCCAATCTTA AAGCCAAAAA ACTGACTTCG
GATCAACCTT CCTCATCCTT ACCTTCGGAA ATTGAGCAAT TAAGGGCTAA ACTTGATCAA
ATCTAA
 
Protein sequence
MEWLGRIGKV VQSQINTLIK EAEDPEKVLE NAIAAMEQEL IAMRRALAEA IATNKSAQRQ 
FVHHQKAADK WYERAQMALE KGNEPLAREA LVNRQAYQIQ AQSIENQLAQ QNQIIAKVKD
DLRNLEHKYS QAKTQKSLYL ARLRSAMASQ RLQEVIGNLN PGNYSSVFEQ IETRILELEA
QSELTQTVNV DPLEKQFAAL ENNKNIDEQL ANLKAKKLTS DQPSSSLPSE IEQLRAKLDQ
I