Gene PCC8801_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_3172 
Symbol 
ID7105891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp3319103 
End bp3319582 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content40% 
IMG OID643476196 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_002373307 
Protein GI218247936 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTC GTATTGGTAA CGGCTACGAT ATTCATCGTT TAGTAGAAGG TCGTCCTCTA 
ATATTAGGAG GAATAGAGAT TCCCCACACA ATGGGTTTAT TAGGACACAG TGACGCTGAT 
GTTCTCACCC ATGCCATTAT GGATGCCATG TTAGGGGCGT TAAGTTTAGG GGATATTGGT 
CATTATTTTG CCCCTTCTGA CCCCCAATGG AAAGGGGCAA ATAGTCTTAT TTTACTGCAA 
CAGGTGAACC AATTAGTGCG ATCGCACGGA TGGCGAATTG GTAATATTGA TTCAGTGATT 
ATTGCAGAAC GGCCTAAAAT GAAACCTCAT ATCAAAAAGA TGCAAGAAAC ATTAGCTGAA 
ACTTTACAAA TTGATCTCGA TCAAATTGGC ATTAAAGCAA CCACTAATGA GCAATTAGGA 
CCAACCGGAA GAGAAGAAGG AATAGCCGTT TATGCAGTGA CGTTATTAGT TAAGGAATAG
 
Protein sequence
MNIRIGNGYD IHRLVEGRPL ILGGIEIPHT MGLLGHSDAD VLTHAIMDAM LGALSLGDIG 
HYFAPSDPQW KGANSLILLQ QVNQLVRSHG WRIGNIDSVI IAERPKMKPH IKKMQETLAE 
TLQIDLDQIG IKATTNEQLG PTGREEGIAV YAVTLLVKE