| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_3158 |
|---|
| Symbol | |
|---|
| ID | 7103900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 3304514 |
|---|
| End bp | 3305905 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643476182 |
|---|
| Product | efflux transporter, RND family, MFP subunit |
|---|
| Protein accession | YP_002373293 |
|---|
| Protein GI | 218247922 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAATC ATCCCCTTCC ATTGTTTCAA AAATTCCTAG GAACTGCCCT AGTTCTGTCT
TTAGTAACCA CTGCTTGTAG TAGTCAAGAA CAAAAGGCTA GTGCACCCCA GTCCATCCCC
GTGAAGTTGC AAACACTACA ACCAGGCACT CTCATTGATA GTAGCCAGTT TGTAGGAACC
CTAGAAGCGA GAGAACGGGT GAATTTAGCT CCTAGTCGGA CTAATGGGCG AATTGTTAGG
ATTTTTGTCA AAGAAGGGGA TGTAGTAAGT CGAGGGCAAA AGTTAGTTGA GATCCAACCG
TATCAAGAAA AAGAAGACGT AAGAGCCGCT ATTGGTAATC TACAGGTAGC TCAAGCCGAT
TTACGGGTAG CTGAGGCGGA ATATCGTCAA CGAGAGGCCG AACGAGATCA AGCCCAAGCT
CAAGTCGAGC AAGCTAGAGC CAATGTTGCC AGGGCTGAGG CTGATGTACA AGATGCTCAG
GCCGAATTTA CCTTAGCCGA ACAAAACTAT CCGAGATCAA AATTTCTTTA TGAGACAGGG
GCTGTCAGTA AAGGAGATGA AACCAGAGGA TTAGATCAAG CTATCCGCAA TTTAGATACC
CGTCAAGCGC AATTAAAGTC CCGTCTACAA ATACGCGATG CAGAAAAAGC TGCTCTCCAG
GCTGCTATAG ACAATTTTCG AGCCTCGCAA AAACGGGTTG AACAATCCTT TGCTAATATT
GATAGTGCCA AATCGGCTAT TGTTCGTGCC CAAGGACAAT TGGGGTCAAC CAGTGAAACG
TTAGATTACA ATTTTTTGAC GGCTCCGATT AATGGGGTCG TGGGAAGTTT TATTGATAAG
AAAGTGGGGG ATAATGTTAA CGTCGGAGAA GGGATTACGA CGTTAACCGA TAATCAAGTT
TTTAATCTTA ATGTGGGCAT TCCCACAGAA AATCGGAATC GCTTGCGCCA AGGACTTCCC
GTAGAAATTA TTAATCCCGA TGGTACACCG GGGGTACGGG GACAAATTAC TTATATTGCG
CCGTTGGTTG AACAAAATGC TCAAGCGATT CAAGTTAAAA TGACTTTCCG TAATGATGGC
AGTTTACGCG ATAAACAATA TGTTCAAGTT CGGGTGATTT GGCAACAACA ACCAGGGGTA
TTAGTTCCGA CTGCGGCGGT GAGTAGTTTG GGGGGACAAA AGTTTGTTTT TATGGCTCAA
TCTGGACAAT CTGGGAATGG CAAAACATCC TTAGTGGCTA AACAAATTCC CGTTAAAGTT
GGGGCGATTC AAGGTCAATC CTATCAGGTG ATTTCGGGTC TTAAACCAGG GGATAGAATT
GCTGTCAGTC GCATTTTAGA TTTACGCGAT GGTCGTCCTA TTCAAGAGGA ATCTCTTAGG
AGTCAAAAAT AA
|
|---|
| Protein sequence | MLNHPLPLFQ KFLGTALVLS LVTTACSSQE QKASAPQSIP VKLQTLQPGT LIDSSQFVGT
LEARERVNLA PSRTNGRIVR IFVKEGDVVS RGQKLVEIQP YQEKEDVRAA IGNLQVAQAD
LRVAEAEYRQ REAERDQAQA QVEQARANVA RAEADVQDAQ AEFTLAEQNY PRSKFLYETG
AVSKGDETRG LDQAIRNLDT RQAQLKSRLQ IRDAEKAALQ AAIDNFRASQ KRVEQSFANI
DSAKSAIVRA QGQLGSTSET LDYNFLTAPI NGVVGSFIDK KVGDNVNVGE GITTLTDNQV
FNLNVGIPTE NRNRLRQGLP VEIINPDGTP GVRGQITYIA PLVEQNAQAI QVKMTFRNDG
SLRDKQYVQV RVIWQQQPGV LVPTAAVSSL GGQKFVFMAQ SGQSGNGKTS LVAKQIPVKV
GAIQGQSYQV ISGLKPGDRI AVSRILDLRD GRPIQEESLR SQK
|
|---|
| |