| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_3146 |
|---|
| Symbol | |
|---|
| ID | 7102446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 3294323 |
|---|
| End bp | 3296749 |
|---|
| Gene Length | 2427 bp |
|---|
| Protein Length | 808 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643476171 |
|---|
| Product | glucan 1,4-alpha-glucosidase |
|---|
| Protein accession | YP_002373282 |
|---|
| Protein GI | 218247911 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
|---|
| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGAA AACGTTGGTT ATTTGCTCCT TTAATTGCCC TGTGTGTGGC TTGCTTATTA
GCAACTAACG CCGCTTGGGC AGTAGGAGGG GGTCTAGCCC CTGGAGCACC GGGAAATCCC
TCGGTTTGGT CCTATGCTGG AAAACAAGGT ATCGGAACCT CCTACGAACA GTATGTTAAC
AACCGCTATC AAGATGGCGG ACCCACCAAT ACTATCTCTA AAGTGTGGTT TTCCCTCGCC
CAAGGCATTG TTACCGAAAC CGCTTACGGA GACATTGATC ACGCTCAACT CAAAGACTTA
CAGTTGTTAG TCACCGGTAA TGATTTCTTA AACGAAGAAA GAGTCGATAC CGATAGTACC
GTGGACTATC TCCATAAGGA TAGCGATGGC CGCCCTCTAT CTCCGGCTTA TCGCCTGGTT
AATACCGCTA AAAACGGCAA ATACACCATA GAAAAGCATA TCTTTACTGA TCCCGATCGC
CAAACCCTAT TTACCCGGGT TATTTTTACC GCCAATGAAG ATAATATTAC CCCCTATGTC
TTGACTAACC CCCACATGAA TAATACCGGG AATCAAGATG TAGCCTTTGT TAACGCCGAT
AGTCTCAACG CCCGTGAAGG GGAAATGGTC TACGCCAGTA TCAAAAGTAG CGAACCTTTT
GTGAAAACCT CGGCCGGCTA TGTTGGGACG AGTGATGGCT ATCAAGACTT AAGCCGCGAT
CGCACTATGG ACTGGACCTA TGACTACACC GATGAGTCCC GGCCAGGAAA CGTCGCTATG
ATGGCTCAAT TGCCCACCCT CAACGCCGGA GAAACCCGTA CCTTTGACAT CGTTGTGGGA
TTTGGTAACA CCTATAACGC AGCTACCGCC CAAGCAGACG GGTCGTTAGA GGAAGGCCAC
GACAGTCTTT TAGCCAAATA CAACGGAGAA GGATCAGCCG TGGGTTGGGA AGACTATATC
GCTAGTCTGA GCAATGTTCC TGCTATGATC CCCAATACGG GAGATAACGG CAAAGAACTC
TACGCCAGTG CCTTTACCCT AAAAAGCATG GAAGATAAAA CCCATGCGGG AGCCTTTATT
GCTTCTTTAT CGGTTCCTTG GGGCGATACC GTGAATGCGG ATAGCTTTGC CACGGGGTAT
CGTGCCGTTT GGCCACGGGA TTTTTATCAA GTGGCTATGG CTTTGTTTGC CCTCGGTGAT
ACCCAAAGTC CCTTAGTAGC CTTTGAATAT TTACCCCAAG TCCAAGTTAC CCGTAATACT
CCCGGCAATA ACGGGGCAAC GGGGTGGTTT TTACAAAAAA CCCACGTTGA CGGAACCTTA
GAATGGGTGG GCGTACAGTT AGACCAAACG GCGATGCCGA TCATGTTGGG TTGGCGGTTA
TGGAAAGCCG GGATTTTGTC TGATAGTCAA ATTAGTGATT ATTATCGCCG GATGTTGAAA
CCAGCAGCCG AATTTATTGC CAATGGTGGT CAAGTGAATA TTCGCTATCC GGGTTCTTCG
AGTTTCAACA CTTTTGATAT TCAACCTCCC CTAACGCAAC AAGAACGCTG GGAAGAACAA
CACGGTTATT CCCCGTCTAC CACCGCAGCA GAAATTACTG GGTTAGTTGT CGCGGCTGAT
ATTGCTCAAA ATGCGGCTAA TGATCCTGGG GCTGCTGCCT ATTACTTGCA AAAAGCGGAT
GAATATCAGC GCAATGTTGA TCCTAAGATG TTCACCACCT CTGGACCTAG TACCCCCTGT
AGTAATCCGG GTGAGTATTT TGTCCGCATT ACTCCCGATG GTAATCCCAA TAGTGGCAGT
ATCATCAACG ATCCTAACAA TTTCAGTCGC AATGATGAAC GTCGTATCCT AGACGGCGGT
TTCTTGGAAT TGGTGCGCTA TGGCGTTCTT AAAGGCAATA ATCCTGACAT TGCAGAAACG
GTCTGTGCTT TGGACAATAC CAGTGTCTCA GATGATGCGC GGGTACGGTA CAATTTGTCC
TTTGATGGTA ATCAGTATCC GGGGTTCCGA CGCTATGGCT TTGATGGCTA TGGCGAACGG
GTTAACGATG GTAGTAACTT CCGTGGTCAG GATTCTAATC AACGGGGACG GATTTGGCCG
TTCTTTACTG GGGAACGGGG TCATTATGAA CTGGCAGCCG CTAAAGCTAA TAATGGCGGA
ACCATTAGTG ATGACCAAGT GGCTCAACTG CGTGATACCT ATGTCCGGGG GATGGAGTAT
TTCGCTAATG ACGGTTTGAT GATTCCTGAA CAGGTTTGGG ATGGTGTGGG GGCTAACGCA
ACCCATAACT ATACTGTTGG AGAAGGAACT AACAGTGCAA CGCCTCTCGC TTGGAGTCAT
GCAGAATACG TCAAATTAGT CAAGTCTTTG ACGGATAAGA AGATTTGGGA TTCCTACGAT
ATCGTTAAAG CGCGATATCA AAATTAA
|
|---|
| Protein sequence | MNRKRWLFAP LIALCVACLL ATNAAWAVGG GLAPGAPGNP SVWSYAGKQG IGTSYEQYVN
NRYQDGGPTN TISKVWFSLA QGIVTETAYG DIDHAQLKDL QLLVTGNDFL NEERVDTDST
VDYLHKDSDG RPLSPAYRLV NTAKNGKYTI EKHIFTDPDR QTLFTRVIFT ANEDNITPYV
LTNPHMNNTG NQDVAFVNAD SLNAREGEMV YASIKSSEPF VKTSAGYVGT SDGYQDLSRD
RTMDWTYDYT DESRPGNVAM MAQLPTLNAG ETRTFDIVVG FGNTYNAATA QADGSLEEGH
DSLLAKYNGE GSAVGWEDYI ASLSNVPAMI PNTGDNGKEL YASAFTLKSM EDKTHAGAFI
ASLSVPWGDT VNADSFATGY RAVWPRDFYQ VAMALFALGD TQSPLVAFEY LPQVQVTRNT
PGNNGATGWF LQKTHVDGTL EWVGVQLDQT AMPIMLGWRL WKAGILSDSQ ISDYYRRMLK
PAAEFIANGG QVNIRYPGSS SFNTFDIQPP LTQQERWEEQ HGYSPSTTAA EITGLVVAAD
IAQNAANDPG AAAYYLQKAD EYQRNVDPKM FTTSGPSTPC SNPGEYFVRI TPDGNPNSGS
IINDPNNFSR NDERRILDGG FLELVRYGVL KGNNPDIAET VCALDNTSVS DDARVRYNLS
FDGNQYPGFR RYGFDGYGER VNDGSNFRGQ DSNQRGRIWP FFTGERGHYE LAAAKANNGG
TISDDQVAQL RDTYVRGMEY FANDGLMIPE QVWDGVGANA THNYTVGEGT NSATPLAWSH
AEYVKLVKSL TDKKIWDSYD IVKARYQN
|
|---|
| |