Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_3137 |
Symbol | |
ID | 7102440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | - |
Start bp | 3282408 |
End bp | 3284231 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643476162 |
Product | dehydrogenase subunit |
Protein accession | YP_002373273 |
Protein GI | 218247902 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAA AAATTGTAAC AGTTGATAGC GAGACTGTCT CTAACACCGT CTACGATGTC GTTATTGTCG GAGCAGGGAT CGCGGGAGCC ATTGTCGCCA AACAATTGAG CGAACAAGGA AAGCGAGTTT TAATCTTAGA AGCGTCCACC AGTGAGGGTC TAACCCTAGA AGGCTTCCAA GGCTATGTCG AAAGATTCTA CGGCTCTGTG GTCAAACACG GTAACTCCCC CTATCCCCTC AATGCCAACG CCTTGAGTCC AACGGATGAC GTGATTCGCT ATTTTGAAGA AAAAGGTCCC TTACCCCTTA GTGGGTCTTA TACACGGGTA TTCGGGGGAA CCACCATGCA CTGGGAAGGC AAAACCCTAC GGATGTTACC CGAAGACTTC AAATTAAAGA CCAATTACGG TCACGGACTC GACTGGCCTA TTACCGATCA AGACCTGTGG AAGTATTATC GTCAAGCGGA GTATGAAATC GGGGTTTCTG GGAACACCGC CGAACAAAGA CAACTCGGCA TTACCTTTGA GTACGATGAT TACGTCTTCC CCATGAAAGA ACTCCCCCCG TCTTACTTAG ATAAGAAAGT ACGGGAGAAG ATACAGGGAA CGACCGTGGA CTTCCATGGA GAAACACGGG AATTAGGCCT AAGTACCTTT CCCCAAGGTC GCAATAGTAT TCCGAACTCA GACTACAAAA CCTACAACGA TGGTTACGAC TTCGTACCCG ATGGAGTAGC GAGTAAAGTC CCGGTTGAGT ATGGAGAACG GTGTCAAGGA AACGCCAACT GTGTGCCTAT TTGTCCCGTT CAAGCCAAAT ATGATGCCAG AAAAACCCTC AATACCATTG CCTTTGGCGA TCGCGTCCAT CTGTTGGCTC AAACCGTCGC TTCTGAAGTA GAAATTGACC CCCAAACCGG TCGAGTGACT GCCATTCACT ACAAACACTA CCAAGATAGA AGCATCCCTT CCTATACCGT AGGAACCGCC AGAGGTAAGC TATTTGTCCT AGCGACTAAT GCCGTCGAAA ACGCTAAATT AATGCTCGCT TCCCACCTAC CGAGCACCAG TGGACTGATG GGACGCAATT TGATGGATCA CCCCTTCGTT CTAGCTTGGG CACTGATGCC TCAAGTTACC GGAACCATGC GCGGTCCCTT GGTCACATCG GGTATTGCCA GTTTCCGTCG AGGAGACTTT CGCAAAGAAC AATGCGCTTT CGGCATCGAT ATCCATAACG ACGGTTGGGG ATGGTCAGGA ACGGGTGCAA CGGATATCGT TCGAGATGCC GTCGATAACC ACAAAAAATA TGGGTCTGAA CTGCGTCAGG AATTAATCAG TCGGATCTCA CGGCAGCTAC TGCTGGCCTT TATGTGCGAA TTACCCGCCG ATCCCAGTAA CCGCGTTAGC ATCGATCCCC ACTATAAAGA TCAAATTGGC AATTATCGTC CCGTTATTCA CTTTAATATC CCCGATTATT GCAAAAAAAC CATCGCCTAT TGCCGTGAGC TTTCTAAGAC GATTTTCCAG CGTTTAGGCG CGGAAGATCA CACCCATTAC GATAAGTCAG ACCCTGCCTA TTTTGAGTAC GAAGGTGAAG GTTACTGGTT CCGAGGAGGG AATCACTTTT CGGGAACCCA TGTCATGGGG ACGACCAAAT ATAACTCCGT GGTCAATGCT CAACAGCGTT CTTGGGATCA TGAGAACCTC TACTTAGTCG GTGCAGGAAG TATGCCTTCT ATTGGTACGT CTAATACAAC CTTAAGTATC GCTGCCTTAG CCTTTTTAGC CTCTGAACAG ATGCTAAAAG ACTTAAACGC TTAA
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Protein sequence | MSQKIVTVDS ETVSNTVYDV VIVGAGIAGA IVAKQLSEQG KRVLILEAST SEGLTLEGFQ GYVERFYGSV VKHGNSPYPL NANALSPTDD VIRYFEEKGP LPLSGSYTRV FGGTTMHWEG KTLRMLPEDF KLKTNYGHGL DWPITDQDLW KYYRQAEYEI GVSGNTAEQR QLGITFEYDD YVFPMKELPP SYLDKKVREK IQGTTVDFHG ETRELGLSTF PQGRNSIPNS DYKTYNDGYD FVPDGVASKV PVEYGERCQG NANCVPICPV QAKYDARKTL NTIAFGDRVH LLAQTVASEV EIDPQTGRVT AIHYKHYQDR SIPSYTVGTA RGKLFVLATN AVENAKLMLA SHLPSTSGLM GRNLMDHPFV LAWALMPQVT GTMRGPLVTS GIASFRRGDF RKEQCAFGID IHNDGWGWSG TGATDIVRDA VDNHKKYGSE LRQELISRIS RQLLLAFMCE LPADPSNRVS IDPHYKDQIG NYRPVIHFNI PDYCKKTIAY CRELSKTIFQ RLGAEDHTHY DKSDPAYFEY EGEGYWFRGG NHFSGTHVMG TTKYNSVVNA QQRSWDHENL YLVGAGSMPS IGTSNTTLSI AALAFLASEQ MLKDLNA
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