| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_3083 |
|---|
| Symbol | |
|---|
| ID | 7105092 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 3224647 |
|---|
| End bp | 3226839 |
|---|
| Gene Length | 2193 bp |
|---|
| Protein Length | 730 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643476107 |
|---|
| Product | glycogen debranching enzyme GlgX |
|---|
| Protein accession | YP_002373220 |
|---|
| Protein GI | 218247849 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
|---|
| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTT CTACCGGTAA ACCCTATCCC CTAGGTGCGA CTTGGGATGG AAAGGGAACA
AATTTTGCTT TATTTTCAGA AAATGCGACA GAGGTTGAAC TTTGCGTATT TGACGAACAA
AATGGAGAGA CGCGAGTTCA ATTAGTCGAG GTTGAAAATC ATGTTTGGTA TGGCTATTTA
GCAGGAATTA AACCCGGACA AAAGTATGGT TTTCGCGTCT ATGGTCCCTA CCAACCAGAA
AAGGGACATT ATTTTAATCC TAATAAATTG CTAGTTGATC CCTATGCTAA AGCGATCGCA
GGAGATGTCA ACTACGGACA AGAACTTTTT AACTATTGTT TAAAGGATTC AAAAAAAACT
CCCACCTTAC ACTATTTAGG GTTAGACAAT GCTTATTTAA TCCCTAAATC TGTGGTGGTT
GATGATAGCT TTGACTGGGA AAAAGATCAA CTTTTAAAAA CTCCTTGGGA GCAAACTATT
ATTTATGAAA CCCACGTTAA AGGATTAACA CAACAACATC CTGATATTCC CGAAAATTTG
CGAGGAACCT ACGCAGGATT AGCCCATCCT GCGATGATTA ATTATTTCAA ATTGCTTGGT
ATTACTGCTA TAGAATTATT ACCCATTCAT CATTATTTTT CGTCCCCCCA ATTTTTACAC
ACAAAAGGAC TAAGGGACTA TTGGGGTTAC AGAACCCTTG GTTATTTTGC TCCCTATTCG
GCCTATAGTT CTAGTGGGAT TTTAGGAGAA CAAGTAACCG AGTTTAAACA AATGGTGAAA
ACCTTACATA AAGCTGGAAT TGAGGTTATT TTAGACGTAG TTTATAACCA TTCTGCTGAA
GGAAGTACGA CAGATCCTAC TTTATGTTTT CGAGGAATTG ACAATAGTAT TTATTATGTC
TTAAATCCAG AAAATAAACG TGAATATTTA GATTTTACGG GGTGCGGAAA TTCCCTCAAT
GTTAATCACT CTCAAGTGCT AAAACTGATT ATTGATAGTT TACGGTATTG GGTAACAGAA
ATGCACGTTG ATGGATTTCG CTTTGACTTA GCACCTACCC TAGCGCGGGA ACTTTTCTCG
GTGGAAGAGA GCATTACAGA GCCTTGTGAA CTCTCTCTTA AAACCTATCA AAAAGACCAT
CTATTTCAAA AAGTAGCCAA AAAAATTACC AAAATTAAAT ATGATCCAGG GGCAGCATTT
TTTGATATCC TTCATCAAGA TCCGATTCTG TCTCAAGTTA AATTAATTGC AGAAGGTTGG
GATATTGCAG ACGGAGGATA TCAAGTCGGT AACTTTCCTA AGTTATGGTC AGAATGGAAT
GACAAATATC GAGATACCAT GAGAAATTTT TGGCGAAGTG AACTACACAA TAACCAAGAA
TTTCTGATGC GCTTTTTGGG GAGTTCTGAT CTCTATAAAC AACAAGGAAA ACGTCCTTAC
GCTAGTCTTA ATTTTATTAC CTGTCACGAC GGTTTTACCC TGAATGATTT AGTCAGTTAC
AATGACAAAC ATAATGACGC TAATGGGGAA AATAACCGTG ATGGGAGCGG TTATAATCAC
TCTTGGAATT GTCAGGTTGA GGGAGCAACA AATGATCCCG AAATTTTAGC CTTACGAGAA
AAACAAAAAC GCAACTTTTT AGTAAGTTTA TTTCTTTCCC AAGGAGTTCC GATGTTATTA
GGTGGGGATG AAATAGGACG AACTCAACAG GGAAATAATA ATGCTTACTG TCAAGACAAT
GCTGAGTTTT CTTGGTTTAA TTGGGACTTA ACTCCAGAGA ATCGTTCTTT AGTAGAATTT
ACGCAGCAGT TGATTCAATT ACGTCGTCAA CATCCCATCT TTTGGCAACG TAATTGGTTA
GATTGCTATG GTAATCAACA AACTATTTAT TGTTTTAATC CTGATGGCAC TCCAATAGAA
GACCAAGAAA TAAAAACCGA TCATCTGTTA GGAATTTGGC TGAACAGTGC AGAAACGGAT
CAATCTAATT TTGATAACAA TGATAGTTTT ATCCTATTGT TTAATGGTCA TTGGGATGAC
TGTCAATTTA GCCTACCTTC TCACTTACAA GATCAGAGTT TGAGAGTCAT TATTGACACT
GATCAAGGAG GTTTTGTGCA AGCAGAAATG TTTTATCAAG GGAGTGAATC CATTTTAGTT
AAGGGGCGAT CGCTGGTTAT ATTATCTTTA TAA
|
|---|
| Protein sequence | MKISTGKPYP LGATWDGKGT NFALFSENAT EVELCVFDEQ NGETRVQLVE VENHVWYGYL
AGIKPGQKYG FRVYGPYQPE KGHYFNPNKL LVDPYAKAIA GDVNYGQELF NYCLKDSKKT
PTLHYLGLDN AYLIPKSVVV DDSFDWEKDQ LLKTPWEQTI IYETHVKGLT QQHPDIPENL
RGTYAGLAHP AMINYFKLLG ITAIELLPIH HYFSSPQFLH TKGLRDYWGY RTLGYFAPYS
AYSSSGILGE QVTEFKQMVK TLHKAGIEVI LDVVYNHSAE GSTTDPTLCF RGIDNSIYYV
LNPENKREYL DFTGCGNSLN VNHSQVLKLI IDSLRYWVTE MHVDGFRFDL APTLARELFS
VEESITEPCE LSLKTYQKDH LFQKVAKKIT KIKYDPGAAF FDILHQDPIL SQVKLIAEGW
DIADGGYQVG NFPKLWSEWN DKYRDTMRNF WRSELHNNQE FLMRFLGSSD LYKQQGKRPY
ASLNFITCHD GFTLNDLVSY NDKHNDANGE NNRDGSGYNH SWNCQVEGAT NDPEILALRE
KQKRNFLVSL FLSQGVPMLL GGDEIGRTQQ GNNNAYCQDN AEFSWFNWDL TPENRSLVEF
TQQLIQLRRQ HPIFWQRNWL DCYGNQQTIY CFNPDGTPIE DQEIKTDHLL GIWLNSAETD
QSNFDNNDSF ILLFNGHWDD CQFSLPSHLQ DQSLRVIIDT DQGGFVQAEM FYQGSESILV
KGRSLVILSL
|
|---|
| |