Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_2885 |
Symbol | secF |
ID | 7104437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | + |
Start bp | 2978161 |
End bp | 2979093 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643475921 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_002373039 |
Protein GI | 218247668 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAA ATGTTATTAA ATCACAACGC TTGTGGTGGT CGATTTCGGG ATTAATTATC CTGATTGGAC TTATCGCAAT GGTCGTTTCC TATTCCACGT TTCAATCTCC CCTACGCCCT GGATTAGACT TTATTGGGGG AACACGACTC CAATTACAAT TAACCTGTGG AGTTCAGGGA AACTGCGAGA AACCCATTAG TACAGGAGAA GTCCAAGAGA TTTTGAACCA ACAGGGCTTA TCTAGTAGTA CCATTCAAGT GTTAGAAGGC AATATTCTGT CTATTCGCAG CAAAACCCTA GATGTAGACC AACGGACTAA ACTACAACAG GCATTAACCG AGAAAATTGG CCAATTTGAC CCCGAAACCG TTCAAATTGA TACGGTTGGG GCAACAGTGG GCAAAGAGTT ATTTACGTCA GGGATTTTAG CCCTTTTGGT GTCTTTCTTT GGCATTATTG TCTATCTCAG TGTTCGCTTT CAATTTGACT ATGCTTTCTT CGCTATTGTT GCCCTAGTCC ATGATGTTTT GGTCACGGCC GGAGTATTTG CCATACTAGG ATTAGTCGCA GGGGTAGAGG TTGATAGTCT ATTCTTGGTG TCCCTATTAA CGATTATTGG TTTCTCGGTT AATGATACGG TCGTTATTTA TGACCGTATT CGGGAAAATT TAGAGAAAAC TCCTGAATTA ACTATTAATG ACATCGTGGA CAATGCCGTT AATCAAACCC TGACCCGTTC GATTAACACC AGTTTAACGA CCGTTTTGCC ACTGATTGCT ATTTTTCTGT TTGGGGGAGA AACCCTCAAA TACTTTGCCC TTGCCTTGAT TATTGGCTTT ATCGCCGGGG CTTATTCGAG TATCTTTATT GCCAGTACCC TACTCGCTTT ATGGCGCAAT CGTCAACAGT TATCAGTAAT CAGTAAACAG TAA
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Protein sequence | MKLNVIKSQR LWWSISGLII LIGLIAMVVS YSTFQSPLRP GLDFIGGTRL QLQLTCGVQG NCEKPISTGE VQEILNQQGL SSSTIQVLEG NILSIRSKTL DVDQRTKLQQ ALTEKIGQFD PETVQIDTVG ATVGKELFTS GILALLVSFF GIIVYLSVRF QFDYAFFAIV ALVHDVLVTA GVFAILGLVA GVEVDSLFLV SLLTIIGFSV NDTVVIYDRI RENLEKTPEL TINDIVDNAV NQTLTRSINT SLTTVLPLIA IFLFGGETLK YFALALIIGF IAGAYSSIFI ASTLLALWRN RQQLSVISKQ
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