Gene PCC8801_2885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_2885 
SymbolsecF 
ID7104437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp2978161 
End bp2979093 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content42% 
IMG OID643475921 
Productpreprotein translocase subunit SecF 
Protein accessionYP_002373039 
Protein GI218247668 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0341] Preprotein translocase subunit SecF 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA ATGTTATTAA ATCACAACGC TTGTGGTGGT CGATTTCGGG ATTAATTATC 
CTGATTGGAC TTATCGCAAT GGTCGTTTCC TATTCCACGT TTCAATCTCC CCTACGCCCT
GGATTAGACT TTATTGGGGG AACACGACTC CAATTACAAT TAACCTGTGG AGTTCAGGGA
AACTGCGAGA AACCCATTAG TACAGGAGAA GTCCAAGAGA TTTTGAACCA ACAGGGCTTA
TCTAGTAGTA CCATTCAAGT GTTAGAAGGC AATATTCTGT CTATTCGCAG CAAAACCCTA
GATGTAGACC AACGGACTAA ACTACAACAG GCATTAACCG AGAAAATTGG CCAATTTGAC
CCCGAAACCG TTCAAATTGA TACGGTTGGG GCAACAGTGG GCAAAGAGTT ATTTACGTCA
GGGATTTTAG CCCTTTTGGT GTCTTTCTTT GGCATTATTG TCTATCTCAG TGTTCGCTTT
CAATTTGACT ATGCTTTCTT CGCTATTGTT GCCCTAGTCC ATGATGTTTT GGTCACGGCC
GGAGTATTTG CCATACTAGG ATTAGTCGCA GGGGTAGAGG TTGATAGTCT ATTCTTGGTG
TCCCTATTAA CGATTATTGG TTTCTCGGTT AATGATACGG TCGTTATTTA TGACCGTATT
CGGGAAAATT TAGAGAAAAC TCCTGAATTA ACTATTAATG ACATCGTGGA CAATGCCGTT
AATCAAACCC TGACCCGTTC GATTAACACC AGTTTAACGA CCGTTTTGCC ACTGATTGCT
ATTTTTCTGT TTGGGGGAGA AACCCTCAAA TACTTTGCCC TTGCCTTGAT TATTGGCTTT
ATCGCCGGGG CTTATTCGAG TATCTTTATT GCCAGTACCC TACTCGCTTT ATGGCGCAAT
CGTCAACAGT TATCAGTAAT CAGTAAACAG TAA
 
Protein sequence
MKLNVIKSQR LWWSISGLII LIGLIAMVVS YSTFQSPLRP GLDFIGGTRL QLQLTCGVQG 
NCEKPISTGE VQEILNQQGL SSSTIQVLEG NILSIRSKTL DVDQRTKLQQ ALTEKIGQFD
PETVQIDTVG ATVGKELFTS GILALLVSFF GIIVYLSVRF QFDYAFFAIV ALVHDVLVTA
GVFAILGLVA GVEVDSLFLV SLLTIIGFSV NDTVVIYDRI RENLEKTPEL TINDIVDNAV
NQTLTRSINT SLTTVLPLIA IFLFGGETLK YFALALIIGF IAGAYSSIFI ASTLLALWRN
RQQLSVISKQ