Gene PCC8801_2884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_2884 
SymbolsecD 
ID7104436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp2976632 
End bp2978044 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content45% 
IMG OID643475920 
Productpreprotein translocase subunit SecD 
Protein accessionYP_002373038 
Protein GI218247667 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0342] Preprotein translocase subunit SecD 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGAC AGCGTTTATT ATTGGGTTTC ATTGCGGTAT TAGCTATTAC TTCCATCTTC 
ATTTTGTCCA CCCTTGGACT ACAACTAGGA TTAGACTTGA AAGGGGGAGC TCAATTAACC
ATTCTTGTCA AACCCACCAA AGAAGTCCCG CGCATCAGTC CTGAAGACTT ACAAGCGGAA
AAAACCATCC TAGAAAATCG GGTGAATGCC TTGGGGGTAA CGGAAGCTTT TGTTCAGACC
TTGGGAGAAG ATAAAATCGT TATTCAGTTA CCCGGAGTCA CTGACCCTGA ACAGGCCGAA
CGGGTGTTAG GGGGAACGGC ACAATTAGAA TTTCGGGAAC AAAAACAGGG TACAGAAGGG
CAATTTCAAG CTGAATTTAC GATTAAACGT CAGTATGAAG CTGAATTGGC CACCCTCAGA
CAAGCAGCCA AAACCCCCGA AACTGCCCAA CGGATAGAGG AACTGAATAA ATCCATCGAA
AAATCTAACG AAGCTGTCTT ATCGCTGTTT CAATCGGTTG ATTTAACGGG AAAAAACCTC
AAGAGTGCCC GTCCGAGTCC TACTCAGTCA GGCAATAATT GGGACGTAGC TATTAGCTTT
GATGATGCCG GGGGCAAAAA GTTCGCAGAA TTGACCAAAA ACCTCGCAGG AACGGGTCGT
AGTATCGGAA TTTTCCTCGA TAATAGCCTT ATTAGTGCCC CCGTAGTTGG AGTAGAGTTT
GCCAACACTG GAATCACCGG AGGAAATGCC GTCATTACGG GTAACTTTAC CATTGACAGT
GCCAATGACC TCGCTGTACA AATTCGCGGG GGTTCCTTGC CTTTTCCCGT GGAAGTCGTA
GAAAACCGTA CCGTTGGCGC AACCTTGGGT CAAGATAGTA TCCGAAGCAG TATCTATGCC
GGGTTAGCCG GATTAGTTCT AGTATTAATC TTTATGGCGG TTTATTATCG TCTTCCTGGG
GTCATTGCTG ATGTCGCATT GGGAATTTAC ACGCTATTAA CCTTAGCTGC TTATTCCTTA
ATTGGCGTAA CTTTGACGCT GCCTGGAATT GCTGGATTTA TTCTCAGTAT TGGTATGGCG
GTAGATGCTA ATGTACTAAT TTTTGAGCGA ACCCGTGAAG AATTGCGAGA AGGCAATAGT
CTTTATCGTT CCGTTGAAGC TGGATTTTAC AACGCTTTTT CGAGTATTTT AGATAGTAAT
GTCACCACCT TAATCGCCTG TGGTGCGCTA TTTGGCTTAG GGTCAGGATT AGTGAAAGGG
TTTGCTTTAA CATTGGCGAT TGGGGTTGCT GTTAGTATGT TTACGGCCTT AACTTGTAGT
CGAACCTTCC TCTTATTAAC GGTTTTAGGA GTACCCACAG TTCGTCAGAA ACCTCAACTC
TTTTGCCCTA ATTTACCCAC AATTGCTAAG TAA
 
Protein sequence
MQRQRLLLGF IAVLAITSIF ILSTLGLQLG LDLKGGAQLT ILVKPTKEVP RISPEDLQAE 
KTILENRVNA LGVTEAFVQT LGEDKIVIQL PGVTDPEQAE RVLGGTAQLE FREQKQGTEG
QFQAEFTIKR QYEAELATLR QAAKTPETAQ RIEELNKSIE KSNEAVLSLF QSVDLTGKNL
KSARPSPTQS GNNWDVAISF DDAGGKKFAE LTKNLAGTGR SIGIFLDNSL ISAPVVGVEF
ANTGITGGNA VITGNFTIDS ANDLAVQIRG GSLPFPVEVV ENRTVGATLG QDSIRSSIYA
GLAGLVLVLI FMAVYYRLPG VIADVALGIY TLLTLAAYSL IGVTLTLPGI AGFILSIGMA
VDANVLIFER TREELREGNS LYRSVEAGFY NAFSSILDSN VTTLIACGAL FGLGSGLVKG
FALTLAIGVA VSMFTALTCS RTFLLLTVLG VPTVRQKPQL FCPNLPTIAK