Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_2884 |
Symbol | secD |
ID | 7104436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | + |
Start bp | 2976632 |
End bp | 2978044 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643475920 |
Product | preprotein translocase subunit SecD |
Protein accession | YP_002373038 |
Protein GI | 218247667 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAGAC AGCGTTTATT ATTGGGTTTC ATTGCGGTAT TAGCTATTAC TTCCATCTTC ATTTTGTCCA CCCTTGGACT ACAACTAGGA TTAGACTTGA AAGGGGGAGC TCAATTAACC ATTCTTGTCA AACCCACCAA AGAAGTCCCG CGCATCAGTC CTGAAGACTT ACAAGCGGAA AAAACCATCC TAGAAAATCG GGTGAATGCC TTGGGGGTAA CGGAAGCTTT TGTTCAGACC TTGGGAGAAG ATAAAATCGT TATTCAGTTA CCCGGAGTCA CTGACCCTGA ACAGGCCGAA CGGGTGTTAG GGGGAACGGC ACAATTAGAA TTTCGGGAAC AAAAACAGGG TACAGAAGGG CAATTTCAAG CTGAATTTAC GATTAAACGT CAGTATGAAG CTGAATTGGC CACCCTCAGA CAAGCAGCCA AAACCCCCGA AACTGCCCAA CGGATAGAGG AACTGAATAA ATCCATCGAA AAATCTAACG AAGCTGTCTT ATCGCTGTTT CAATCGGTTG ATTTAACGGG AAAAAACCTC AAGAGTGCCC GTCCGAGTCC TACTCAGTCA GGCAATAATT GGGACGTAGC TATTAGCTTT GATGATGCCG GGGGCAAAAA GTTCGCAGAA TTGACCAAAA ACCTCGCAGG AACGGGTCGT AGTATCGGAA TTTTCCTCGA TAATAGCCTT ATTAGTGCCC CCGTAGTTGG AGTAGAGTTT GCCAACACTG GAATCACCGG AGGAAATGCC GTCATTACGG GTAACTTTAC CATTGACAGT GCCAATGACC TCGCTGTACA AATTCGCGGG GGTTCCTTGC CTTTTCCCGT GGAAGTCGTA GAAAACCGTA CCGTTGGCGC AACCTTGGGT CAAGATAGTA TCCGAAGCAG TATCTATGCC GGGTTAGCCG GATTAGTTCT AGTATTAATC TTTATGGCGG TTTATTATCG TCTTCCTGGG GTCATTGCTG ATGTCGCATT GGGAATTTAC ACGCTATTAA CCTTAGCTGC TTATTCCTTA ATTGGCGTAA CTTTGACGCT GCCTGGAATT GCTGGATTTA TTCTCAGTAT TGGTATGGCG GTAGATGCTA ATGTACTAAT TTTTGAGCGA ACCCGTGAAG AATTGCGAGA AGGCAATAGT CTTTATCGTT CCGTTGAAGC TGGATTTTAC AACGCTTTTT CGAGTATTTT AGATAGTAAT GTCACCACCT TAATCGCCTG TGGTGCGCTA TTTGGCTTAG GGTCAGGATT AGTGAAAGGG TTTGCTTTAA CATTGGCGAT TGGGGTTGCT GTTAGTATGT TTACGGCCTT AACTTGTAGT CGAACCTTCC TCTTATTAAC GGTTTTAGGA GTACCCACAG TTCGTCAGAA ACCTCAACTC TTTTGCCCTA ATTTACCCAC AATTGCTAAG TAA
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Protein sequence | MQRQRLLLGF IAVLAITSIF ILSTLGLQLG LDLKGGAQLT ILVKPTKEVP RISPEDLQAE KTILENRVNA LGVTEAFVQT LGEDKIVIQL PGVTDPEQAE RVLGGTAQLE FREQKQGTEG QFQAEFTIKR QYEAELATLR QAAKTPETAQ RIEELNKSIE KSNEAVLSLF QSVDLTGKNL KSARPSPTQS GNNWDVAISF DDAGGKKFAE LTKNLAGTGR SIGIFLDNSL ISAPVVGVEF ANTGITGGNA VITGNFTIDS ANDLAVQIRG GSLPFPVEVV ENRTVGATLG QDSIRSSIYA GLAGLVLVLI FMAVYYRLPG VIADVALGIY TLLTLAAYSL IGVTLTLPGI AGFILSIGMA VDANVLIFER TREELREGNS LYRSVEAGFY NAFSSILDSN VTTLIACGAL FGLGSGLVKG FALTLAIGVA VSMFTALTCS RTFLLLTVLG VPTVRQKPQL FCPNLPTIAK
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