Gene PCC8801_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_2798 
SymbolispG 
ID7104284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp2885570 
End bp2886790 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content47% 
IMG OID643475835 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_002372954 
Protein GI218247583 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACCC TGGAAACGCC TAAACCTTTA ACAAACACGA GCCCTGAATT TGATACTACC 
ATTCATCGCC GCCAAACCCG TCCCGTCAAA GTCGGAGATA TCACCATTGG GGGAGGCTAT 
CCTGTGGTCG TCCAATCGAT GATCAATGAG GATACCCTAG ATATTGAGGG TTCGGTGGCT 
GGTATTCGTC GTTTACACGA AATTGGCTGC GAAATCGTCC GTGTTACCGT TCCTAGCATG 
GCCCACGCTA AAGCCTTAGC CGAAATTAAC CAAAAACTAG CGGAAGTTTA TCGACGGGTT 
CCCCTAGTGG CGGATGTACA CCATAATGGA CTGAAAATCG CCCTAGAAGT AGCTAAGCAC 
GTCGATAAAG TCCGTATTAA CCCTGGATTA TACGTCTTTG AGAAACCTAG TACTACCCGC 
AGTGAATACA CCCAAGCTGA ATTTGATGAA ATTGGCGAAA AAATCAGTGA AACCCTGAAA 
CCCTTGGTCG TTTCGCTACG AGATCAAGGT AAAGCGATGC GAATTGGCGT TAACCACGGT 
TCTCTCGCTG AACGGATGCT ATTTACCTAC GGCGATACTC CTGAAGGGAT GGTAGAATCA 
GCCTTAGAAT TTATCCGTAT TTGCGAATCC CTCGATTTTC GCAACTTAGT CATCTCTCTT 
AAAGCCTCTC GTGTTCCTGT GATGTTAGCC GCCTATCGCT TGATGGTCAA ACGGATGGAT 
GAGTTAGGAA TGGATTATCC CTTGCATTTA GGGGTCACAG AAGCCGGAGA TGGGGAATAC 
GGACGGATTA AGTCTACGGC GGGTATTGCT ACCCTTTTGG CCGAAGGCAT TGGGGATACC 
ATTCGGGTTT CGTTAACCGA GGCCCCAGAA AAAGAAATTC CCGTTTGCTA CAGTATTTTG 
CAAGCCTTGG GACTGCGGAA AACGATGGTG GAATATGTGG CCTGTCCCTC CTGTGGCCGA 
ACCCTATTTA ACTTAGAAGA GGTACTCCAT AAGGTTCGAG AAGCCACCAA ACATTTAACG 
GGGTTAGATA TTGCGGTCAT GGGTTGCATT GTCAATGGAC CGGGAGAAAT GGCTGACGCT 
GACTACGGTT ATGTCGGGAA ACAAGCGGGT TATATTTCTC TGTATCGCGG ACGGGAAGAA 
ATTAAGCGGG TTCCTGAAGA CCAAGGAGTT CAGGAATTGA TTGAATTAAT TAAAGCCGAT 
GGCCGTTGGG TTGAACCATA A
 
Protein sequence
MQTLETPKPL TNTSPEFDTT IHRRQTRPVK VGDITIGGGY PVVVQSMINE DTLDIEGSVA 
GIRRLHEIGC EIVRVTVPSM AHAKALAEIN QKLAEVYRRV PLVADVHHNG LKIALEVAKH 
VDKVRINPGL YVFEKPSTTR SEYTQAEFDE IGEKISETLK PLVVSLRDQG KAMRIGVNHG 
SLAERMLFTY GDTPEGMVES ALEFIRICES LDFRNLVISL KASRVPVMLA AYRLMVKRMD 
ELGMDYPLHL GVTEAGDGEY GRIKSTAGIA TLLAEGIGDT IRVSLTEAPE KEIPVCYSIL 
QALGLRKTMV EYVACPSCGR TLFNLEEVLH KVREATKHLT GLDIAVMGCI VNGPGEMADA 
DYGYVGKQAG YISLYRGREE IKRVPEDQGV QELIELIKAD GRWVEP