Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_2681 |
Symbol | |
ID | 7102074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | + |
Start bp | 2770145 |
End bp | 2771674 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 643475719 |
Product | secretion protein HlyD family protein |
Protein accession | YP_002372838 |
Protein GI | 218247467 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAACG GCTTTAAAAA ACCACATATT CTTGAACAAA CGCAAAATCA TTTATTAGAA GATGATGAAT TAATTTTACC CATTGTGGAA ACGAACCCTA GGGATGATTG GGCTCATTCA ACAAAAGATC TGCTAGATAC TTTGCCCCGT GTTTGGACAA GGGGTTTGCT GTACTTTTTG GTCATTTTTG TTAGTATTGC TTTGCCTTGG GCAATGTTAG CCAAAGTGGA TGAAACAGGA AAGGCGATCG GCAAGTTAGA ACCCAAGGCA AAAACCTTAA AATTAGATGC TCCTGTCGAT GGAAAGATTG CTTTCATTAA TGTCAAAGAA GGCGATATTG TTAAGCCAGG ACAACGGTTA ATTGAGATTG AATCTGAGTT AATCCAAGGG GATTTAAAAC AGCACCAAAC TAAACTAGAA GGAGAAGAAC AACGGTTACA TCAATTAAAT ATTTTAGAGA AACAATTACA GTTAGTTTTC CAGACTCAAC AGCAACAAAA TGAAGCCCAA AAATTAGAAA AACTTGCTCA AGTAAATCAA GCAAGACAGA ATCTTGATCA ACTGAGAAAT TCCTATGGAT TACAAAAGGA AGAAAAGCAA GCACAAGTCA ATCAAGCTCA ACAGGATTTA GAACATAATC AAAAAGCCGT TAAATTGGCA GAAATTCAGT TAAAAAATGC CCAAGGGGTT AAAGATCGTT ATTCCTCTGC CGTTGAAGAA GGGATTGTTT CCCAAATTCA GGTAGTAGAA AGGGAAGATA CAGTACAGGA AAGGAAAAAA ACCTATGAAC AAGCCAAGTC TGATATTGAA CAGGCAAAAC ATCGTTTAGC AGAACAAAAA AGTAGTTATG AACGGACGAT TAAACAAGCT AGTGCTGATA TTAAGGAAGC AGAATTAAGG CTGAAAGAAC AAGAAAACAG CTATGATAGT TTAGTCCAGT CAGGGGAACT ATCTTTGCTC AAAAATAAAG AACAAATTAA TAACCTACAA ACGGAAATTA CGACCCTTAA ATCAGACATA AAACAAACCA AAAGTCAAAT TCAAAATTTG CAGTTTCAGT TAAGCCAAAG AGTCGTAAAA GCTCCTGTTG CAGGAACGGT TTTTGATTTA CCGATTGAAG CGGAAGGAGC CGTTGTTCAA CCAGGAAATC GACTTTTAGA AATTGCGCCT CAAGGAACAC CTTTGATTTT ACGAGCGCAA ATGGCTACAT CAGAAAGTGG TTCTGTGACT AAAGGAATGC CTGTTAAAAT AAAGTTTGAT GCCTATCCTT TTCAGGATTT TGGGATAATA GAAGGAAAAT TAATTGAGGT TTCTCCAACG ACATCAGAGA TAGATACCTC AGAGGGTAAA ACATTAGCTT ATGACCTAAA AATTGAACTC AATCAAACTT GTATGCCAAC CCCTAAAGAG TGTATTACAT TACGTCCTGG CGATACAGCA ATTGCAGAGG TTATTATCCG TCAGCGTCGC ATGATTGATT TTGTTCTTGA TCCCTTTAAG AAATTACAAC AAGGAGAGTT TAAGCTTTAG
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Protein sequence | MTNGFKKPHI LEQTQNHLLE DDELILPIVE TNPRDDWAHS TKDLLDTLPR VWTRGLLYFL VIFVSIALPW AMLAKVDETG KAIGKLEPKA KTLKLDAPVD GKIAFINVKE GDIVKPGQRL IEIESELIQG DLKQHQTKLE GEEQRLHQLN ILEKQLQLVF QTQQQQNEAQ KLEKLAQVNQ ARQNLDQLRN SYGLQKEEKQ AQVNQAQQDL EHNQKAVKLA EIQLKNAQGV KDRYSSAVEE GIVSQIQVVE REDTVQERKK TYEQAKSDIE QAKHRLAEQK SSYERTIKQA SADIKEAELR LKEQENSYDS LVQSGELSLL KNKEQINNLQ TEITTLKSDI KQTKSQIQNL QFQLSQRVVK APVAGTVFDL PIEAEGAVVQ PGNRLLEIAP QGTPLILRAQ MATSESGSVT KGMPVKIKFD AYPFQDFGII EGKLIEVSPT TSEIDTSEGK TLAYDLKIEL NQTCMPTPKE CITLRPGDTA IAEVIIRQRR MIDFVLDPFK KLQQGEFKL
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