| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_2657 |
|---|
| Symbol | |
|---|
| ID | 7102057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 2742030 |
|---|
| End bp | 2743883 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 643475696 |
|---|
| Product | diguanylate cyclase/phosphodiesterase |
|---|
| Protein accession | YP_002372815 |
|---|
| Protein GI | 218247444 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1716] FOG: FHA domain
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTAG GGAATAATAA AGCAAAAGAG AAGTATGTTT TGATTATCGA AGATAGTCAT
TCTAGGCAGA CCATTATGCT AGAAGAAGAC AAGTATTCTA TTGGCCGTCA TTCGAGTAAT
TCTATTGTTA TTCCCTCACG ACAAATTTCG CGTATACACG CGACTTTAAT CCGCAAAATT
AATCGCCAAA CTGATCAAGA CTCTTTCTGG ATTCTCGATG GAGATCTCGA AGGAAATAGA
AGTCAAAATA GAATTTTTGT CAATGGAGAA AAATGCCTAG TTCATGAACT CAAAGATGGC
GATTTGATTA ACTTTGGTTG TGAAGTCAAT GCCAGCTATC ATCTACTTTC CTCTGGAACC
ATTTCTGAAA CGCTTGTTGA TCAAAATTGT CATTCAAAAA TTGACAATCC TGAGCCAGAA
AAAGAAACTC AAGTGATGGA AAAATTTCCA AGATTACAGC CCTACGATCC CCATAAACAA
GAAACCTTGC GCCTTGATAT TTCCCCAATA CAAGATGAAA ATGATGAAGA TACTTTTATT
GAAAAATCCT ATACTGATCC TCTGACGGAT TTACCTAATC AAATTTTAGT TAACGAATAT
CTTTCTATCG CTTTAACTAA TGCTAAACGA AATAAAAATC TAGTGGGTTT AATTCTAATT
GATATCAAAG ATTTCAAGAA AATTAATGAT AATGTTAGCT ATAGTATTGG TGATCAGATA
CTACAACAAA TTGCCAAAAG ATTGAAAGAC TATTTACGAT CAGGGGATAT TGTTGGTCGT
TGGGGAGGCG ATCAATTTAG TATTTTGTTA ACTCAAGTTA AAACTATTGA AAACGTTGAA
AAAGTTATTA AGCGTCTGAT CAAAATTCTC CAAGAACCCT TACCAATTGA CAAGCAAATT
TATACTTTAG ACTACTATCT TGGACTTGCG ATATACCCTC AAGATGGAGA TGGATCTCAA
CGGTTAATTG GTTATGTAGA AAGACAAATT GCTGATGCTA AAAAATCAGG TAACTGTATC
ACATTAAAAG AAGCTTCTGC TGAAATTAAT AGTCAATTAT TACAGTTCCA AAAGCGATTA
AAACAAGCGT TGATTCACCA GGAACTGTCC TTACATTATC AACCTCAAGT CAATATTATC
ACTGGGCAAA TAGAAGGAGT AGAAGCCTTA ATTCGTTGGC ATCATCCAAA ACAGGGTTTA
CTTCTACCGC AAAAATTTCT ATCTTGGGCA GAAAAAACCG ATCTCTTAAT CCCTTTAACT
CGTTGGATCT TAGAAACAGC TTGTACTCAA AATAAAGCTT GGCAAAACGA TGGTTTACCT
CCTATCTTAA TGTCTGTTAA TCTTTCGACT GAACAATTTT ATCATCCTCA ATTAATTAAA
TTAATTAAAC AAGTTTTATT AGCTACTGGT CTTAAATCCC GTTGGTTAGA GTTAGAAATT
ACAGAGACGA CTATTTTAAA AGATTCCCAG AAAGCTTATC GAATTTTAAA AGCGTTGCAG
CATCTTGGCG TTTCCCTTTG TCTAGACGAT TTTGGCAAGG GATATGGGGC GATTAGTTAC
TTATCAGATA GTCCTTTCCA AAAACTGAAA ATTGATCTTT CAGTCATCCA AAAATTAAAA
GAAAATCCTG AAAATACGAT GATGATTTCT GCCTTAATTG CGTTAGCAGA AAAGTTCCAA
ATGAGAGTCG TTGCTGAAGG GGTGGAAACC CAACAACAAC TCGATGTACT CTATACGCTT
CAATGTGATG CCATACAAGG GTATCGTTTT AGTCGTCCAC TTCCAGTGGA GGAAGCGACG
GAGTTTCTAC AATTTAATAG TCATTCAAAC GTAATTTTGC AGTTTGGTTT GTAA
|
|---|
| Protein sequence | MNLGNNKAKE KYVLIIEDSH SRQTIMLEED KYSIGRHSSN SIVIPSRQIS RIHATLIRKI
NRQTDQDSFW ILDGDLEGNR SQNRIFVNGE KCLVHELKDG DLINFGCEVN ASYHLLSSGT
ISETLVDQNC HSKIDNPEPE KETQVMEKFP RLQPYDPHKQ ETLRLDISPI QDENDEDTFI
EKSYTDPLTD LPNQILVNEY LSIALTNAKR NKNLVGLILI DIKDFKKIND NVSYSIGDQI
LQQIAKRLKD YLRSGDIVGR WGGDQFSILL TQVKTIENVE KVIKRLIKIL QEPLPIDKQI
YTLDYYLGLA IYPQDGDGSQ RLIGYVERQI ADAKKSGNCI TLKEASAEIN SQLLQFQKRL
KQALIHQELS LHYQPQVNII TGQIEGVEAL IRWHHPKQGL LLPQKFLSWA EKTDLLIPLT
RWILETACTQ NKAWQNDGLP PILMSVNLST EQFYHPQLIK LIKQVLLATG LKSRWLELEI
TETTILKDSQ KAYRILKALQ HLGVSLCLDD FGKGYGAISY LSDSPFQKLK IDLSVIQKLK
ENPENTMMIS ALIALAEKFQ MRVVAEGVET QQQLDVLYTL QCDAIQGYRF SRPLPVEEAT
EFLQFNSHSN VILQFGL
|
|---|
| |