Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_2530 |
Symbol | |
ID | 7101709 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | - |
Start bp | 2623639 |
End bp | 2624421 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643475572 |
Product | TPR repeat-containing protein |
Protein accession | YP_002372694 |
Protein GI | 218247323 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA TAATTTATCT GTTAGGAGTT TTAAGTAGTC TTTTGATGGT TAATTCTGTG GTATTAGCTC AGCAATCTAC CAATAATTCT CCCTCAAATG CCGTGGGATG GTACAATCAA GGGGTTGATA AAATTGGTGC AGGAAATTAT CAAGGGGCGA TCGCAGATTT TACCCAAGCC ATACAACTCG CGCCTCAAGA TCCAGATTCC TACTACAATC GAGGCTATGC TTACCATATC ATAGGGAAGA TCGATCAGGC TCTGGCTGAT TATAACCTAG CCATTCAATT GAATCCCCAA TTTGCCTATG CCTACGGCAA TCGCTGTTAT GCTTTCTATC AAATGAAAGA CTATCAAAAG GCTTTGTCTG ATTGTTCCGA GGCCATTAAA CTTAATCCTA ATTATGCCGA TTTTTATATC TATCGGGGTA ATGCTCAAGA TGATCTAGGG AATCATCAAG CGGCGATCGC AGACTATACT GAAGCCATTC GTCTTAATAG CAACTATGCT AAAGCCTATT ATAACCGAGC CTTGGCTTAC AATCGTGCCC AACTTTTGCC AGAAGCGATC GCAGATTACA CGAAATCTGT TCAATTAGAC CCGAATTTTG CTGATGCTTA CTACAATCGA GGGATAACTC AGTTTAAACT AGGCAATGAA TCAGAAGCGA TCGCCGATCT CCAAAAAGCC TCTCAACTCT TTAAAACTCA AGGTAACACA ACCTATAGTC AAAAAGCCAA CGATACCCTC CAAAAACTGC AAATGGATAT GGATTCCCGT TAA
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Protein sequence | MNKIIYLLGV LSSLLMVNSV VLAQQSTNNS PSNAVGWYNQ GVDKIGAGNY QGAIADFTQA IQLAPQDPDS YYNRGYAYHI IGKIDQALAD YNLAIQLNPQ FAYAYGNRCY AFYQMKDYQK ALSDCSEAIK LNPNYADFYI YRGNAQDDLG NHQAAIADYT EAIRLNSNYA KAYYNRALAY NRAQLLPEAI ADYTKSVQLD PNFADAYYNR GITQFKLGNE SEAIADLQKA SQLFKTQGNT TYSQKANDTL QKLQMDMDSR
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