Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_2461 |
Symbol | |
ID | 7101599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | + |
Start bp | 2543899 |
End bp | 2546616 |
Gene Length | 2718 bp |
Protein Length | 905 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643475504 |
Product | TPR repeat-containing protein |
Protein accession | YP_002372627 |
Protein GI | 218247256 |
COG category | [S] Function unknown |
COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTTTC GTTACCTACG TTTTGTCTCA ATCTCTTTAA TTAGCTTGGT TTTAAGTCTA TTTTTAACGA CCTATCCCTG GTTGTCAGTG ATTGCGTCTA GTCCTCCTCT TAACTCAATT AATCAAAGTC AACGACTAGA ACAAGCAAAA CAATGGTATC AACAGGGTCA ACTCAACTTA GCCATTGAAA CTTGGCGAGA AATAGCGATT TATTATGAAG AACAAGAAGA TCAACTCAAC CAAGCGCATA TATTAACCTA TTTAGCGTTA GCTTATTCTC AATTAGGAGC CTGGACAGAG GCTGAAGAAT CGATTAATGA TAGTTTAACT TTATTACAAG AAACGATTAA AACTAAGACA GAAGTTTGTT TACCAATTTT AGCAGAAGCC TTAAATGTCC AAGGAACATT ATTTTTAGCT AAAGGGGATG CTTTATCAGC TTTATCAAGT TGGGAAAAAG CGACAAATAC CTATGAGCAA GTCAGAGATG AATCAGGAAT TTTTCGTACT AAAATTAATC AAAGTATGGC ATTAAAAGCA TTAGGAAGCT ATTCGAGAGC TTGCGAAAAG TTAGTAGAAG TTTTTAGCAA TAATTCATTA ACTTGTAAAC CTCTTAATCT TAAAAAAATA AATGATTTAT TCTCAAGTTC TCTAGAGTCT TTATCGAGTA TTAAAATAGC TGGTTGGAGT AGTTTAGGAG AAGTGTTAAA AGAAATGGCT GAACTGGACA GTTCTCAATT CATTTTTGAA ACACTCTTGG AAAAGTCACC AGCAACAGAA CAGCAAGCCA GCTTATTAGT TAATTTAGCA AAAACCCTAC AATTACAGGG AAATATTGAA GAAGCTCAAG AAAAATTAAT AAGAGCGATC GCACTTTCTA AAAATTCTCA AACCCAAGTC AAAGCGCAAC TGATACAACT TCAATTATTG ATCAATCAAA AACAATGGAA TCAAATTGAA GCTTTGGTTA GCAATTTAGT CAATCAAATC TCTCAATTAC CCCTCAATCA AACTAAAATT GATGCTCAAC TAACGTTAGC GCAACGCTTA ATGGAAATTA AATCACCATC GTGGCAAGAA ATTGACCAAT TATTGCTTGA AGCTCAGAAA AATTCGGAAA CTATTGGATA TATCAGAGGA CAAGCCTTTA GTCTCGGTAA TCAAGGAGAA CTTTATGAAC AATTAGCACT TAGTAAAGTG TGCTATCTTA ACAACAACAA TCTTAGTCGC TACAGACAAC AAACCCCCCT AAATTGTCAT CAAGTTTATC AATTTACAGA TATCAAACAG TTAGAAGCGA TACCAAGTCA ACTGTGGAAA AAAGCGTCTC AATTTACCGA ACAAGCCCTC AAACATTCTC AAGCCCTACA AGCCCCAGAA ATGACCTATT TATGGCAATG GCAACTGGGG AGAATTTTAG CTGAATCGGG GCAAACAGGG GCAATAGAAG CCTATTTAGC AGCTATTGAG ACCCTTGAAA CAATTACCAA TCAGTTAGGA ACCAATCGGG AATTTCAATT TTCCTTTCAA GAAAAAGTAG AACCCTTGTA TCGTCAATTG TTGAGTCTTT TGTTACCCCG CAATAATCAA GACTCGGTTC CTCAAGAACA ATTAGTAGAA GCGCGTCAGC AAATTGAGGC CTTACAAGCA GCAGAATTGA ATAATTTCTT TAGGGATGTT TGTGTGCAAA GTGAACCTGT GGCGATTGAA GACATTGATC CCCAAGCGGC TGTGATTTAT CCCTTAATTT TACGCGATCG CTTAGTGGTT CTTCTGAGTC TTCCCAAACA ACCCCTACAA GCGTATGTGG TTCCGATAGA ACAAGAAGAG TTAGAAAAAA TCCTTCGGGA CTTTCGCTAC AATATCGTCA TTCGCAGCCA ACGGGAGTTT TTTATCAATG CAGAACAACT CTATGATTGG CTTATCCGTC CTTTTAACCA ACGATTACAG CAATCTAGCA TTAAAACTCT GATTTTTGTT GCTGATGGCG TTTTTAGAAA TGTTCCTCTA GCAGCTTTAT ACGATGGTCA ACAATATCTC ATCGAAAACT ATGGCGTATC TTTAACCCCT GGATTAACTT TATTGTCTCC TGAATCCTTA CAACAAAAGG GGTTAAATAC TCTGTTTGCT GGATTAACGG CTGAAACGCC CAAAGACGGC TTTATTCCCC TATTTTACGT TCAACAAGAG TTACAGGCTG TTAAGTCCCA AGTCCCTAGT CTGTCTTTAC TTAATGAGCA ATTTACCTTA AGCAATTTAC AAGATAATCT CCAGGATAAT TTCTTTCCGA TTCTTCATTT TGCCACCCAT GGTCAGTTTA GTTCGCAATT TGAAGAGACG TTTCTACTAG CCTGGAACAG TCGCATTAAT ATTTTACAAT TGGAACGACT ATTAAAAGAA AGCGCACCCA CTCAAAGAGC AGCCATTGAA TTATTAATTC TGAGTGCTTG TGAAACCGCT ACAGGCGATC GCCGTGCTGC TTTAGGATTA GCCGGGTTTG CGGTTCGTGC TGGTGCCAGG AGTACTTTAG CGACGCTTTG GTCTGTTAAT GACCAAGGGA CAGCACTATT AATGGAACAG CTTTATAATC AATTAGCTCA ACAAAAAATC TCTAAAGCTG AAGCTCTACG ACAAGCACAA TTAGTCTTAT TAAAAGACCG TTGGTATCGA CATCCTTTTT ACTGGTCGCC TTATATTTTA GTGGGAAATT GGCTTTAA
|
Protein sequence | MFFRYLRFVS ISLISLVLSL FLTTYPWLSV IASSPPLNSI NQSQRLEQAK QWYQQGQLNL AIETWREIAI YYEEQEDQLN QAHILTYLAL AYSQLGAWTE AEESINDSLT LLQETIKTKT EVCLPILAEA LNVQGTLFLA KGDALSALSS WEKATNTYEQ VRDESGIFRT KINQSMALKA LGSYSRACEK LVEVFSNNSL TCKPLNLKKI NDLFSSSLES LSSIKIAGWS SLGEVLKEMA ELDSSQFIFE TLLEKSPATE QQASLLVNLA KTLQLQGNIE EAQEKLIRAI ALSKNSQTQV KAQLIQLQLL INQKQWNQIE ALVSNLVNQI SQLPLNQTKI DAQLTLAQRL MEIKSPSWQE IDQLLLEAQK NSETIGYIRG QAFSLGNQGE LYEQLALSKV CYLNNNNLSR YRQQTPLNCH QVYQFTDIKQ LEAIPSQLWK KASQFTEQAL KHSQALQAPE MTYLWQWQLG RILAESGQTG AIEAYLAAIE TLETITNQLG TNREFQFSFQ EKVEPLYRQL LSLLLPRNNQ DSVPQEQLVE ARQQIEALQA AELNNFFRDV CVQSEPVAIE DIDPQAAVIY PLILRDRLVV LLSLPKQPLQ AYVVPIEQEE LEKILRDFRY NIVIRSQREF FINAEQLYDW LIRPFNQRLQ QSSIKTLIFV ADGVFRNVPL AALYDGQQYL IENYGVSLTP GLTLLSPESL QQKGLNTLFA GLTAETPKDG FIPLFYVQQE LQAVKSQVPS LSLLNEQFTL SNLQDNLQDN FFPILHFATH GQFSSQFEET FLLAWNSRIN ILQLERLLKE SAPTQRAAIE LLILSACETA TGDRRAALGL AGFAVRAGAR STLATLWSVN DQGTALLMEQ LYNQLAQQKI SKAEALRQAQ LVLLKDRWYR HPFYWSPYIL VGNWL
|
| |