Gene PCC8801_2428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_2428 
Symbol 
ID7101573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp2505067 
End bp2507691 
Gene Length2625 bp 
Protein Length874 aa 
Translation table11 
GC content36% 
IMG OID643475472 
ProductDNA polymerase III subunit alpha 
Protein accessionYP_002372595 
Protein GI218247224 
COG category[L] Replication, recombination and repair 
COG ID[COG0587] DNA polymerase III, alpha subunit 
TIGRFAM ID[TIGR00594] DNA-directed DNA polymerase III (polc)
[TIGR01445] intein N-terminal splicing region 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTTG TTGGCTTACA TATCCACAGT GATTATAGTT TACTCGATGG AGCATCTCAA 
TTAAATGCTT TAGTTGATCG CGCGGTAGAA TTAGAAATGC CAGCGATCGC TTTAACGGAT
CATGGGGTGA TGTATGGGGC GATCGAATTA ATGAAGGTTT GCCGTAATAA AGGAATTAAA
CCTATTATTG GCAATGAAAT GTATGTGATT AATGAAGATA TTGAGGTCAA TAAACGGCAT
CGAAAATATC ATCAAGTTGT TTTAGCAAAA AATACCCAAG GCTATAAAAA TCTAGTTAAA
CTAACAACTA TTTCCCATCT TAAAGGGATT CAAGGAAAGG GGATTTTTGC CCGTCCTTGT
ATTAATAAAG AATTACTGAC CCAATACCAT GAAGGCTTGA TTGTTACCAG TGCTTGTTTA
GGGGGAGAAG TGCCCCAATC GATTTTAGCA GGGGATACTA AACAAGCGAA AACCGTGGCA
AAATGGTATC AAAAACTCTT CAAGGATGAC TATTATTTAG AAATTCAAGA TCATGGATCA
CAAGAAGATC GAATTGTCAA TAGAGAATTA GTAAAAATTG CCCGTGATTT AGGCATAAAA
ATTATTGCAA CCAATGACTC TCATTTTATT TCCTGTTATG ATGTAGAAGC CCATGATGCC
CTACTTTGTA TTCAAACCGG TAAACTAATT ACTGAAGATA AACGGCTCAG ATATAGTGGG
ACTGAATATC TCAAATCCGC CGAAGAAATG GCGTTATTAT TTCGCGATCA TCTCCCTGAT
GATGTTATTG AAGAAGCGAT TAACAATACC CTCGAAGTTG CAGATAAAAT TGAGCCTTAC
AAGAACATTT TTGGAGAGCC TCGCATTCCT AATTATCCCG TTCCTTCGGG ACATACTCCC
GATAGTTATG TTGAAGAAAT TGCTTGGGAA GGGTTGCTTG AAAGGCTAAA ATGTCGCTCC
CGTGGGGAAA TTTCAGACGT TTATAAAGAA CGGCTAGAAT ATGAATTAAA AATGCTCCAA
AGGATGGGCT TTTCTACTTA TTTTTTAGTC GTTTGGGATT ATATTAAATA TGCGAGGGAT
AATGGTATTC CCGTAGGACC CGGACGCGGT TCTGCTGCGG GTTCTTTAGT TGCCTATTGT
TTAAAAATAA CCAATATTGA TCCCGTGCAT CACGGACTTT TATTTGAAAG ATTTTTGAAT
CCTGAACGTA AATCTATGCC TGATGTTGAT ACAGATTTTT GTATTGAAAG ACGGGATGAA
ATGATTAAGT ATGTCACAGA AAAATACGGA GAAGCGAATG TCGCTCAAAT TATTACCTTT
AACCGCATGA CTTCCAAAGC AGTCTTAAAA GATGTGGCTA GGGTATTAGA TATTCCCTAT
TCAGAGTCAG ATAAAATGGC AAAAATGATT CCTGTTTCAC GGGGCAAACC AACTAAATTA
AAAGTCATGA TTTCTGATGA AACTCCCTGT CCTGAATTTA AGGAAAGATA CGATAATGAT
CCTCAAGTTC GTCGCTGGTT AGATATGGCA ATTCGTATTG AAGGGACTAA CAAAACCTTC
GGGGTTCATG CAGCAGGAGT CGTTATTTCT TCTGAACCAC TAGATGAAAT TGTCCCGCTA
CAAAAAAATA ATGAAGGTTC TGTTATTACT CAATATTTCA TGGAAGATTT AGAGTCCCTT
GGACTGCTAA AAATGGACTT TTTGGGTTTA AGAAATTTAA CGACTATTCA AAAAACAGCA
GAGTTAATTA AACAAAATAG AAAGGTTGAA TTAGACTTAG ATCAATTACC CTTAGAAGAA
AGAAAGGCCT TACAAATCAT TGCGAAAGGA ACAGCCAAAA AGCTACCTGA AGATATACAA
AAAACCCATA AATTACTTGA AAGAGGTGAT TTAGAAGGGA TTTTTCAGCT AGAATCATCG
GGAATGAAAC AGATAGTTAA AGATCTAAAA CCATCAGGAA TTGAAGATAT TTCTTCTATC
TTAGCACTCT ATCGTCCAGG TCCTTTAGAT GCGGGACTCA TTCCTAAATT TATTAACCGT
AAACATGGAC AAGAACCGAT TAAATATGAA CATCGTTTAT TAGAACCCAT TTTAAAAGAA
ACCTACGCTG TTTTGGTGTA TCAAGAACAA ATCATGAAAA TGGCACAAGA TTTAGCAGGG
TATTCTTTAG GAGAAGCGGA CTTATTACGT CGCGCAATGG GTAAGAAAAA AATCTCCGAA
ATGGAAAAGC ATCGGGAAAA ATTTATTGAA GGTGCAGCGA AAAATGGAGT GATCAAAGAA
ATTGCTGAAA ATTTGTTTAC CCAAATGGTT CAATTTGCTG AGTATTGTTT GAGTTACGAT
ACAGAAATTT TAACTGTTGA ATATGGAGCA ATTCCTATCG GTAAAGTCGT CGAAGAAAAT
ATTGATTGTA CAGTGTATAC GGTGGATAAA AATGGCTTTG TTTATACACA AAATATTGCT
CAATGGCATT TAAGAGGTCA ACAAGAAGTG TTTGAATATT ATTTAGATGA CGGGTCAATT
CTTCGAGCAA CGAAAGATCA TCAATTTATG ACTCTAGAAG GAGAAATGCT ACCCATTCAT
GAGATTTTTG AAAGAGGGTT AGAACTGAAA AAAATTAAAA TCTAA
 
Protein sequence
MSFVGLHIHS DYSLLDGASQ LNALVDRAVE LEMPAIALTD HGVMYGAIEL MKVCRNKGIK 
PIIGNEMYVI NEDIEVNKRH RKYHQVVLAK NTQGYKNLVK LTTISHLKGI QGKGIFARPC
INKELLTQYH EGLIVTSACL GGEVPQSILA GDTKQAKTVA KWYQKLFKDD YYLEIQDHGS
QEDRIVNREL VKIARDLGIK IIATNDSHFI SCYDVEAHDA LLCIQTGKLI TEDKRLRYSG
TEYLKSAEEM ALLFRDHLPD DVIEEAINNT LEVADKIEPY KNIFGEPRIP NYPVPSGHTP
DSYVEEIAWE GLLERLKCRS RGEISDVYKE RLEYELKMLQ RMGFSTYFLV VWDYIKYARD
NGIPVGPGRG SAAGSLVAYC LKITNIDPVH HGLLFERFLN PERKSMPDVD TDFCIERRDE
MIKYVTEKYG EANVAQIITF NRMTSKAVLK DVARVLDIPY SESDKMAKMI PVSRGKPTKL
KVMISDETPC PEFKERYDND PQVRRWLDMA IRIEGTNKTF GVHAAGVVIS SEPLDEIVPL
QKNNEGSVIT QYFMEDLESL GLLKMDFLGL RNLTTIQKTA ELIKQNRKVE LDLDQLPLEE
RKALQIIAKG TAKKLPEDIQ KTHKLLERGD LEGIFQLESS GMKQIVKDLK PSGIEDISSI
LALYRPGPLD AGLIPKFINR KHGQEPIKYE HRLLEPILKE TYAVLVYQEQ IMKMAQDLAG
YSLGEADLLR RAMGKKKISE MEKHREKFIE GAAKNGVIKE IAENLFTQMV QFAEYCLSYD
TEILTVEYGA IPIGKVVEEN IDCTVYTVDK NGFVYTQNIA QWHLRGQQEV FEYYLDDGSI
LRATKDHQFM TLEGEMLPIH EIFERGLELK KIKI