Gene PCC8801_2071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_2071 
Symbol 
ID7104312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp2141327 
End bp2144038 
Gene Length2712 bp 
Protein Length903 aa 
Translation table11 
GC content48% 
IMG OID643475128 
ProductPhycobilisome linker polypeptide 
Protein accessionYP_002372259 
Protein GI218246888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTTA AGGCAAGTGG TGGAAGCTCG TTAGCACGGC CCCAACTGTA TCAGACGGTT 
CCCGTTTCTG CGATCACACA AGCAGAACAA CAGGATCGCT TTTTGGCGAA CCCCGAACTC
AATGAGTTGG TCGCCTATTT TCAATCAGGA AGCAAGCGAC TAGCGATCGC CCAGATATTA
ACCGACAATT CCGACCTAAT TGTCTCACGG GCAGCTAATC GTATCTTCAC TGGGGGGTCC
CCCATGGCAT ATCTCGAAAA ACCCCCAGTG GAGGAAGTCA GAGAAATGGC CATGGCTGGA
GGAGGACAAG CTCCCAGTCT ACAAAGAAGT ATGGCTTTAG GAACCGTGAC CTATGCCGAA
GGTGGCGGTG GTGGCGGCGG CGGCTTTTTC GGAGGCTTAC GCTCAATCTT AAGTTCCACA
GGACCGATTC CTGCCGGGTT CCGTCCCATC AATATCTCCC GCTATGGTCC GAGCAATATG
CAAAAGTCCT TGCGGGATCT ATCGTGGTTC TTGCGCTATG TCACCTATGC CATTGTCGCT
GGAAACCCCA GTATTATCGT CGTGAACACC CGTGGACTAC GGGAAGTAAT TGAAAGAGCC
TGTTCAACAG ATGCGACCAT TGTAGCCCTG CAAGAAATGC GAGCCGCAGC CAGAGATTAC
TTCCGTCAGG ATGCCGAAGC TCAGGCGATC GTCACCGAAT ACTTCGATGT CCTGATCACC
GAATTTAAAG CACCGACCCC CTCTAATAAA TTGCGTCAGC GTCCTTCATC GGATCAGCAA
GGATTAGCTC TGCCCCAAAG TTACTACAAT GCGGCACAAA CACGGCAAAA ATTCGTCATG
AAGCCGGGCT TATCGGAGTC AGAAAAATCG GCAGTCGTCA AAGCAGCCTA TCGTCAACTG
TTTGAACGGG ATATTACCCG CGCCTACGGC CAGTCGATTT CCTATCTCGA ATCTCAGGTA
AGAAACGGCG ACATCTCCAT GAAAGAGTTC GTCCGTCGCC TGTGTAAGTC TCCCTTGTAT
CGCAAGCAAT TCTTCGAGCC CTTCATCAAC AGTCGTGCCC TAGAATTGGC CTTCCGTCAT
ATTTTGGGTC GTGGTCCGAG TTCCCGGGAA GAAGTACAAA CCTACTTTTC GATCGTCTCT
AGTGGTGGAT TAGCTGGTCT GGTAGATGCT TTAGTCGATT CTCAGGAGTA TTCCGACTAC
TTTGGGGAAG AAACTGTTCC CTATCTTCGC GGATTAGGAC AAGAAGCTCA AGAATGCCGT
AACTGGGGAA TGCAGCAAGA TCTGTTTAAC TACAGCGCAC CTTTCCGCAA AGTACCTCAA
TTTATCACGA CCTTCGCTAA ATACGATCGC CCCTTACCCG ACCAGCACGT TTACGGCTCA
GGGAATGATC CCCTAGAAAT TCAATTTGGG GCAATTTTCC CGAAAGAAAC CCGTAATCCG
AGCAATCGTC CTGCGCCCTT TAGCAAAGAT ACCAAACGGA TTCTCATTCA CCGTGGACCA
GGGATTAATA ACCAAAATAG CAATCCTACC GCACGGGGTG AATTCCCTGG ATCATTGGGA
GCCAAAGTTT TCCGCTTAAA TAACGAACTC CCTGGCAGCA GCAACGGAGT GAGTATTAAA
TACGGGGAAA GTTCCACGCA AGCAGTGATT CGCGCTGCCT ATCGCCAAGT CTTTGGACGG
GATGTCTATG AAGGGCAACG GCTAAGTGTC GCAGAAGTTA AGCTAGAAAA CGGCGAAATT
ACCCTACGGG AGTTTATCAA AACCTTAGCG AAATCGGACA CCTTCCTCAA GACCTACTGG
ACTCCTTTCT ATGTGGTCAA GGCGATCGAA TATATCCACC GTCGTCTTTT GGGTCGTCCT
ACCTACGGCC GTCAGGAGAT GAACAAATAT TTCGATCTAG CCTCGAAAAA AGGTTTCTAT
GCCCTTGTCG ATGAGATGAT CGATAGTAAA GAGTATAGCG AAGCCTTTGG CGAAGATACT
GTCCCCTACG AACGCTATTT AACCCCTGCC GGAATGCAGC TACGCATGGC GCGTCCCGGG
TCAATTCGTG AGGATATTGG TCAACGGGTA GACAAGGAAA CGACTCCCCG CTTTATCGAG
TTGGGACAAG TTAGTGCGAT CCGTACCGAA CCCGAAATTG CTTTCCGCAT TAATCAAGGG
GTTACGGTTG AGCGTCAGCA AACCAAGATC TTTAAGTTAC TCTCAACAGC CGATAAAGTG
GCGGTTAAAA ACGTCATTCG CGCTGCCTAC CGTCAGATTT TTGAACGGGA TCTCGAACCT
TACATTGTTC AAGCAGAATT TACCGCTCTT GAAAGTAAGC TGAGTAATGA GGAAATTTCT
GTTAAAGAGT TCATTGAACA GTTAGGCTGT TCTGATCTTT ATATCAAGGA ATTTTATGCT
CCCTATCCCA ATACTAAGGT TATTGAATTG GGAACTAAAC ATTTCCTCGG TCGGGCACCG
TTAACCCAGA AAGAGATCCA AAAATACAAT CAAATTCTGG CAACTCAAGG CATTCGTGCC
TTTATTGGAG CCATGGTTGA TAGCATGGAA TACTTACAAT TGTTCGGGGA AGATACGGTT
CCCTATCGTC GTTTCCCGAC CCTTCCTGCG GCGAATTTCC CCAATACGGA ACGGCTTTAT
AATAAGCTGA CTAAGCAGGA TAAAGAGTTG GTGGTTCCTA GTTTTGAACC CGTGGTTAAA
GTGGGTGGTT AA
 
Protein sequence
MSVKASGGSS LARPQLYQTV PVSAITQAEQ QDRFLANPEL NELVAYFQSG SKRLAIAQIL 
TDNSDLIVSR AANRIFTGGS PMAYLEKPPV EEVREMAMAG GGQAPSLQRS MALGTVTYAE
GGGGGGGGFF GGLRSILSST GPIPAGFRPI NISRYGPSNM QKSLRDLSWF LRYVTYAIVA
GNPSIIVVNT RGLREVIERA CSTDATIVAL QEMRAAARDY FRQDAEAQAI VTEYFDVLIT
EFKAPTPSNK LRQRPSSDQQ GLALPQSYYN AAQTRQKFVM KPGLSESEKS AVVKAAYRQL
FERDITRAYG QSISYLESQV RNGDISMKEF VRRLCKSPLY RKQFFEPFIN SRALELAFRH
ILGRGPSSRE EVQTYFSIVS SGGLAGLVDA LVDSQEYSDY FGEETVPYLR GLGQEAQECR
NWGMQQDLFN YSAPFRKVPQ FITTFAKYDR PLPDQHVYGS GNDPLEIQFG AIFPKETRNP
SNRPAPFSKD TKRILIHRGP GINNQNSNPT ARGEFPGSLG AKVFRLNNEL PGSSNGVSIK
YGESSTQAVI RAAYRQVFGR DVYEGQRLSV AEVKLENGEI TLREFIKTLA KSDTFLKTYW
TPFYVVKAIE YIHRRLLGRP TYGRQEMNKY FDLASKKGFY ALVDEMIDSK EYSEAFGEDT
VPYERYLTPA GMQLRMARPG SIREDIGQRV DKETTPRFIE LGQVSAIRTE PEIAFRINQG
VTVERQQTKI FKLLSTADKV AVKNVIRAAY RQIFERDLEP YIVQAEFTAL ESKLSNEEIS
VKEFIEQLGC SDLYIKEFYA PYPNTKVIEL GTKHFLGRAP LTQKEIQKYN QILATQGIRA
FIGAMVDSME YLQLFGEDTV PYRRFPTLPA ANFPNTERLY NKLTKQDKEL VVPSFEPVVK
VGG