Gene PCC8801_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_2020 
Symbol 
ID7104787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp2093438 
End bp2094364 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content38% 
IMG OID643475079 
ProductSpermine synthase 
Protein accessionYP_002372211 
Protein GI218246840 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID[TIGR00417] spermidine synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGTA CAGAAATTAA GGCAGATTTG TGGGTTAATG AGTATATTAC TCCGTGGGAT 
ATTTATAGTC ACGGAGTTAC CCGTATTCTT GCTTATAAAA AAACCCAGTA TCAGGAGATG
TATATTGTTG AAAGTGGTGC CTATGGTAAG GCATTAGTAC TAGATGGAAA ATGGCAATCT
TGTACGGGGG ATGAATTTAT TTATCATGAA GGGTTAGTTC AACCAGGAAT GATTTCCCAT
CAAGCTGTTA AAAAAGCGTT AATTTTAGGG GGAGGAGAAG GGGCAACTAT TCGAGAAATT
TTGCGCTGGA AAGCAATAGA AAAGGTTATG ATGATTGATA TTGATGGAGA AGTGGTAGAT
GCTTGTAAAG AATATTTGCC AGAAATGCAC CAAAATTGTT TTGATGATCC ACGGGTAGAA
CTAAAGATTG ATGATGCTTT AGAAGTCTTA GATAATATGT CTGAAAAATG GGATCTTATT
GTTTCAGATT TATCTGATCC CATTGAAGAG GGACCCTCAT TTCCCTTATT TACTAAAGAA
TATTATGAGA AGCTTCAAAA AGTCTTGAAT CCAGGGGGAT TAGTCATTAT TCAAGCGGGA
CAAGTTGCCC CTCCTTTTAT TAAATATCAT GCGCGTTTAG TTAATACCTT AAAAGCCGTT
TTTCCTTACG TTCATCCCTA TTTTGCTCCC ACCCCTAGCT ATGGTTCTCC TTGGGGATTT
GCCATTGCCA GTCACGAACC TGTCAATACT GTACCTGATC CCATTGCTGT TGATCAATTA
TTGGCAGAAC AAACCACAGG AGGATTACGA TTAATCGATG GACAAACCCT CTTAGGAATG
TTACAAACTC CTTTGTATAT TCGACAAGCG ATCGCCAACT ATACCGAAGT TTATACCCTC
AAAGAACCGC CTAAGTTTTT TAGTTAA
 
Protein sequence
MSGTEIKADL WVNEYITPWD IYSHGVTRIL AYKKTQYQEM YIVESGAYGK ALVLDGKWQS 
CTGDEFIYHE GLVQPGMISH QAVKKALILG GGEGATIREI LRWKAIEKVM MIDIDGEVVD
ACKEYLPEMH QNCFDDPRVE LKIDDALEVL DNMSEKWDLI VSDLSDPIEE GPSFPLFTKE
YYEKLQKVLN PGGLVIIQAG QVAPPFIKYH ARLVNTLKAV FPYVHPYFAP TPSYGSPWGF
AIASHEPVNT VPDPIAVDQL LAEQTTGGLR LIDGQTLLGM LQTPLYIRQA IANYTEVYTL
KEPPKFFS