Gene PCC8801_2016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_2016 
Symbol 
ID7104784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand+ 
Start bp2090110 
End bp2091180 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content48% 
IMG OID643475077 
Productphotosystem q(b) protein 
Protein accessionYP_002372209 
Protein GI218246838 
COG category 
COG ID 
TIGRFAM ID[TIGR01151] photosystem II, DI subunit (also called Q(B)) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACCA CCTTACAACA ACGCGAGAGC GTTTCCGTTT GGGAGCAGTT CTGTCAGTGG 
GTAACAAGCA CCAACAACCG TCTTTATGTC GGCTGGTTCG GTACTTTAAT GATCCCCACC 
CTCTTAACTG CAACCACTTG CTTCATCATC GCTTTCATCG CTGCACCTCC CGTGGACATC 
GATGGTATCC GTGAACCCGT TGCTGGTTCT TTACTTTATG GAAACAACAT CATCTCTGGT 
GCAGTTGTTC CTTCTAGCAA CGCTATCGGA TTACACTTCT ACCCCATCTG GGAAGCTGCT 
TCTCTTGATG AGTGGCTCTA CAACGGCGGA CCTTACCAAT TAGTAGTCTT CCACTTCTTA 
ATCGGAGTAT TTTGCTACTT AGGCCGTCAG TGGGAACTAT CTTACCGCTT AGGAATGCGT 
CCTTGGATTT GCGTAGCCTA CAGCGCACCT GTTTCCGCAG CTACTGCCGT GTTCTTAATC 
TACCCCATCG GACAAGGTTC TTTCTCTGAT GGAATGCCTT TAGGAATTAG CGGAACCTTC 
AACTTCATGT TCGTGTTCCA AGCTGAGCAC AACATCCTAA TGCACCCCTT CCATATGTTG 
GGAGTTGCTG GTGTCTTTGG TGGTTCTTTG TTCTCCGCTA TGCACGGTTC TTTAGTCACC 
TCTTCCTTAG TCCGTGAAAC CACTGAAATC GAGTCTCAAA ACTACGGTTA CAAGTTCGGA 
CAAGAAGAAG AAACCTACAA CATCGTAGCT GCTCACGGAT ACTTTGGACG TTTAATCTTC 
CAATACGCAT CCTTCAACAA CAGCCGTGCC TTACACTTCT TCTTAGGTGC ATGGCCTGTA 
ATCGGTATCT GGTTCACCGC AATGGGTGTA TCTACCATGG CTTTCAACCT CAACGGTTTC 
AACTTCAACC AATCGATTCT TGACTCACAA GGTCGCGTAA TCGGAACCTG GGCTGATGTA 
CTCAACCGTG CAGGAATTGG AATGGAAGTA ATGCACGAGC GCAACGCTCA CAACTTCCCC 
TTAGACTTAG CTTCTGCTGA GCCTGTGTCT GCTCCTGCTA TCAATGGTTA A
 
Protein sequence
MTTTLQQRES VSVWEQFCQW VTSTNNRLYV GWFGTLMIPT LLTATTCFII AFIAAPPVDI 
DGIREPVAGS LLYGNNIISG AVVPSSNAIG LHFYPIWEAA SLDEWLYNGG PYQLVVFHFL 
IGVFCYLGRQ WELSYRLGMR PWICVAYSAP VSAATAVFLI YPIGQGSFSD GMPLGISGTF 
NFMFVFQAEH NILMHPFHML GVAGVFGGSL FSAMHGSLVT SSLVRETTEI ESQNYGYKFG 
QEEETYNIVA AHGYFGRLIF QYASFNNSRA LHFFLGAWPV IGIWFTAMGV STMAFNLNGF 
NFNQSILDSQ GRVIGTWADV LNRAGIGMEV MHERNAHNFP LDLASAEPVS APAING