| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_1999 |
|---|
| Symbol | prfC |
|---|
| ID | 7104770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 2073747 |
|---|
| End bp | 2075366 |
|---|
| Gene Length | 1620 bp |
|---|
| Protein Length | 539 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643475060 |
|---|
| Product | peptide chain release factor 3 |
|---|
| Protein accession | YP_002372192 |
|---|
| Protein GI | 218246821 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG4108] Peptide chain release factor RF-3 |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGCG AACTTCAGAC AGAAATCCAA GAAGCCGTTG AGAAACGGCG TAATTTTGCC
ATTATTTCCC ACCCAGACGC AGGAAAAACC ACTTTAACCG AAAAACTCCT ACTCTACGGA
GGAGCCATTC ACCAAGCAGG AGCCGTCAAA GCCAGACGCG ATCAGCGTAA AGCTACCTCT
GACTGGATGG AAATGGAAAA ACAACGGGGA ATCTCCATTA CCTCCACCGT TCTCCAATTT
GAGTACCGAA ACTTCCAAAT TAATCTCCTC GATACCCCCG GACACCAAGA CTTTAGCGAA
GATACCTATC GTACCCTCGC CGCGGCCGAT AATGCCGTCA TGTTAATCGA TGCAGCCAAG
GGGTTAGAAC CTCAAACCCG CAAACTGTTT GAAGTCTGTC GTCTGCGGGG ACTTCCTATT
TTTACCTTTA TTAATAAACT CGATCGCCCC ACCAGAGAAC CTCTAGAATT ACTCGATGAA
ATTGAACAGG AATTAGGACT GAAAACCTAT GCCGTGAATT GGCCTATCGG AACAGGCGAT
CGCTTTAAAG GCGTTTTTGA CCGCCGTCAC CAGGGTATAC ACCTGTTTGA ACGTCGTGCC
CACGGTAGCC AACAGGCTCA GGAAACCGCC ATTAAGCTTG GCGACCCCAA AATTGAAGCA
CACCTCGAAC AAGAGCTTTA TTATCAGCTA AAAGAAGAGT TAGAAATCCT CCAAGAGTTG
GGGGGAGATC TGGACTTAAA AGAACTCCAC GATGGCCAGA TAACCCCCGT CTTTTTTGGT
TCAGCCATGA CCAACTTTGG CGTGCAGTTA TTCCTCGAAG CCTTCCTAGA ATACGCTTTA
CAACCCGAAG GACGCAATTC TTCTGTGGGA GTGGTTGACC CCACCCATCC CGAATTTAGT
GGCTTTGTTT TCAAATTACA GGCCAATATG GACCCGAAAC ACCGCGATCG CGTTGCATTT
GTGCGGGTTT GTACAGGTAA ATTCGAGAAG GACATGACCG TTAGTCACGC CAGAACGGGG
AAAACCGTCC GTTTATCCCG TCCTCAAAAG CTTTTTGCCC AAGATCGGGA GTCCATCGAG
GAAGCCTATG GGGGGGATGT AATTGGGTTA AATAACCCTG GAGTCTTTGC CATTGGCGAT
ACTATCTATA GCGGAACTAA GTTGGAATAC GAAGGTATCC CTTGCTTTTC GCCTGAAATA
TTCGCCTATC TGAAAAATCC TAATCCGTCT AAATTCAAAC AATTTCAAAA AGGTATTCAG
GAACTGCGCG AAGAGGGAGC AATCCAGATT ATGTACTCTA CCGACGACTT TAAACGCGAT
CCCATTTTAG CGGCTGTTGG ACAGTTGCAG TTTGAAGTGG TGCAGTTTCG GATGTTAAGC
GAATATGGGG TAGAAACGAA CCTAGAACCG CTTCCCTACA GTGTTGCCCG TTGGGTAACA
GGAGGATGGA CTGCATTAGA AAAAGCTGGA CGCATCTTTA ATAGTATGAC CGTTAAAGAT
AATTGGGATC GTCCCGTCTT ATTGTTTAAA AATGAATGGA ATTTAAACCA AGTTAAGGCA
GATAAACCCG AATTAGGCTT AAGTTCTACT GCCCCCGTTG GTTCAGGAAT AAACGAATAA
|
|---|
| Protein sequence | MSSELQTEIQ EAVEKRRNFA IISHPDAGKT TLTEKLLLYG GAIHQAGAVK ARRDQRKATS
DWMEMEKQRG ISITSTVLQF EYRNFQINLL DTPGHQDFSE DTYRTLAAAD NAVMLIDAAK
GLEPQTRKLF EVCRLRGLPI FTFINKLDRP TREPLELLDE IEQELGLKTY AVNWPIGTGD
RFKGVFDRRH QGIHLFERRA HGSQQAQETA IKLGDPKIEA HLEQELYYQL KEELEILQEL
GGDLDLKELH DGQITPVFFG SAMTNFGVQL FLEAFLEYAL QPEGRNSSVG VVDPTHPEFS
GFVFKLQANM DPKHRDRVAF VRVCTGKFEK DMTVSHARTG KTVRLSRPQK LFAQDRESIE
EAYGGDVIGL NNPGVFAIGD TIYSGTKLEY EGIPCFSPEI FAYLKNPNPS KFKQFQKGIQ
ELREEGAIQI MYSTDDFKRD PILAAVGQLQ FEVVQFRMLS EYGVETNLEP LPYSVARWVT
GGWTALEKAG RIFNSMTVKD NWDRPVLLFK NEWNLNQVKA DKPELGLSST APVGSGINE
|
|---|
| |