| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_1944 |
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| Symbol | |
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| ID | 7102892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8801 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011726 |
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| Strand | - |
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| Start bp | 2021169 |
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| End bp | 2022629 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643475006 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002372138 |
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| Protein GI | 218246767 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAATTC ATACACCCGA CTGGGTTAAA CACGCGGTTT TCTATCAAAT TTATCCCGAT
AGTTTTGCCC GAACAGTTCC TCCTGATCAA CAATGGTTAC TCAATATTCC CCTAGAAAAT
TGGCAAGCTT CTCCAACCTT TCAAGGATAC AAAGGGGGTA ATCTTTGGGG GGTAATTGAT
CAACTGGATT ATTTGCAAGA TCTGGGCATT ACAGCCCTCT ATTTTACCCC GATCTTTCAG
TCGGCTTCTA ACCATCGCTA CCATACCCAT GACTATTATC AAGTTGATCC TCTTTTAGGG
GGAAATGAAG CCTTCCACAA GATGCTAAAA GAAGCCCACA AACGTAATAT AAAAGTGGTC
TTGGATGGAG TTTTTAACCA TGCCAGTCGG GGCTTTTTCT TCTTTAATGA TATCTTAGAA
AATGGACCTA ATTCTCCTTG GTTAAATTGG TTTAAAATTA CCGGATGGCC GCTTTCGGCT
TATGATGGAA ATCTTCCCGC TAACTATGTT TCTTGGGTTA ATTATCGCGC CTTACCAGAG
TTTAATCACG ATAACCCTGC GGTGCGAGAA TATATTATGA AAGTAGCAGA ATATTGGTTA
CATCAAGGGA TTGATGGTTG GCGGTTAGAT GTGGCTGCTT GCATTAAAGC AGAGGGGTTT
TGGCAGGAGT TTCGACAACG GGTAAAAGCC ATTAATGCTG ACGCTTATAT TGTTGGAGAA
ATTGTCGATG ATGCTACCCA ATGGTTAGAT GGAACACAAT TTGATGGGGT GATGAATTAT
CCCTTTGGTC GTGCTACTAT TGCTTTTATT GCGGGCGATC GCGTCGTAAC AAATACCGTG
CCTTCTTTCT ATCAACCCTA TCCTGCCATA GACGCTGCCC AATATTCTGT AGAAATTAAT
AATTTATTAC AACGTCATCC TTGGGAAATT GAATTAACCC AATTAAACTT ACTCGATAGC
CACGATACTG CTAGATTAAT TAGCATTGCC GATGGCGATC AATCTACCGT AGAATTAGCA
ACATTATTAC TATTTACCTT TCCTGGTGCG CCTAATATTT TTTATGGCGA TGAAATTGGT
TTACCGGGAG GCCATGAACC AGACTGTCGT CGTGGTTTTC CTTCTGAGGA TCAATGGAAT
CAAGACGTTT TAAATTATCA CCGTCAATTC ATTAAATTAC GCCATCATTA TCCAGCTTTA
CGAATTGGAG AATATCACAC TCTTTATGCC CAACAACAAG TTTATATTTT TGCCCGGATT
TTAGGTAGAG AAGTTTTAAT TATTGCGATC AATGCTGATA GATCTTCTCA AGAAATAAAT
TTATCTTTAG CAGAAAAATT TCAGTCAATT ACTAACGTCA AACCTAATAA CATAGTTTAT
GGAAAAGGAA GCATTAATTG GGATGAATCT AGTATAAGTT TTAGTCTTCC TCCTCGTGAT
GGACTAATCA TTGCCTCTTA A
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| Protein sequence | MSIHTPDWVK HAVFYQIYPD SFARTVPPDQ QWLLNIPLEN WQASPTFQGY KGGNLWGVID
QLDYLQDLGI TALYFTPIFQ SASNHRYHTH DYYQVDPLLG GNEAFHKMLK EAHKRNIKVV
LDGVFNHASR GFFFFNDILE NGPNSPWLNW FKITGWPLSA YDGNLPANYV SWVNYRALPE
FNHDNPAVRE YIMKVAEYWL HQGIDGWRLD VAACIKAEGF WQEFRQRVKA INADAYIVGE
IVDDATQWLD GTQFDGVMNY PFGRATIAFI AGDRVVTNTV PSFYQPYPAI DAAQYSVEIN
NLLQRHPWEI ELTQLNLLDS HDTARLISIA DGDQSTVELA TLLLFTFPGA PNIFYGDEIG
LPGGHEPDCR RGFPSEDQWN QDVLNYHRQF IKLRHHYPAL RIGEYHTLYA QQQVYIFARI
LGREVLIIAI NADRSSQEIN LSLAEKFQSI TNVKPNNIVY GKGSINWDES SISFSLPPRD
GLIIAS
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