| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_1906 |
|---|
| Symbol | |
|---|
| ID | 7105167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 1983722 |
|---|
| End bp | 1985416 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643474967 |
|---|
| Product | thiamine pyrophosphate protein central region |
|---|
| Protein accession | YP_002372100 |
|---|
| Protein GI | 218246729 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGTA ATCTAATTCC TTGGGGTTCT CGTCCTAGGA CTGGTGCACG GGCGATCGCT
GAACAGTTAG CCAAGGCGGG ACTCATCGGA GAGTCTGATA ATTTATTGAT GGGAAACCCT
GGCAGTGGAG AACATTGGCT GTACCTAGAA CTGACGGATT ACATCAAAAT GGGGTTAGCT
GAGCCAGCAG TGGGTAGTAT GCTCGATGGG GCGAGTCGGA TCACGTCTAA ACCCGCGATC
GCTATTGCCC ATGGATTTGT CGGGTTTTCG GGACTACAAG GCAGTGTCTT TAATGCGGCT
CAACGGCAAA GTCCTCTATT AGTCATTGTG GGAACGGCGG ACTCTCACGC CCATACGGGA
GAAACTCATA TGTATGCGGA CGTAGAAGGC GCAGCAAAGG CAGCAGGGTC CAAATACGTC
AAAAACGCTA CTGATCCGGC GACGCTGCTG CGAGATTTGC GCGATGCCAT TATTGAGGCG
CAAATTCCCC CGTTTGGACC GGTTGTCTTT ATTGTTGGGT CAAATGTGGC TAATGCCCCC
AATACAGAAC CCGTTATCGT CCCCAAATTG CCTAACTGTC AACTCGCGCC CCCCTACAGT
GAGATCGAAA TCTTGGCAGA GGAACTACTT AAGGCTGAAA AACCGACTCT GTTGGTGGGG
GATGGCATAG CCAGAAGTCA AGCGCACCAA GAACTTTTAG CTGTCGCTGA AGCCTTGGGA
GCGGATGTTT GGGCTTCCAT GGAGTCGGAG GTGAATTTTC CTCGCATCCA TGCACTGTAT
CGGGGCAATC TCGGCCACAT GGATGATGCC CGGGGTCGAG ATTTGCTCAA AGCGGTAGAT
TGTGCGCTTG CGGTGGGGAC TCCCGTTTAT CAAACGGTGT TTAATTCTAA ATTGCCCTTA
TTCTCGCCTA ATACGGTTCT AGCAGCGATT AATTATGATC CGGAAACTTC CCTGCGAGGC
CACAATGATA TTACTTTACC CATTAAGGGC GATCCCAAAC GCATCTTGGG AATGTTGCTA
ACGGTGATCC AACAGAAACA GACGGCGACG CAAAGGGATC AGGCTAAGCA ACGTTTGATG
TTACGAGAAC AAGAAAAGTC GGCTTTGATG GCACAACGGC GTACAACCCA ATTGGCACAA
CCAGGGGTAA CGATCGCTAA ATTTGGCTAT TTCCTTGAAC AAAGACTCAA AGATCTCAGC
GATCGACCGA TTATTTTCAA TGAAGCTTTA GAGGGGGCTG TTGGCTTAAC AGATTATCTG
GAAAATGTCA ACATTCCAGG GAAATATTTC GATACGTCTG GAGGTTCCCT CGGTGAGTGG
GGTGGTGCGG TGGGTGCATC CTTGATTCAC GGACGGACTA TCGTTTTTAT CGGGGATGGG
GGCTTTCATT ACCCACTACA AGCTCTTTGG AATGCAGCAC AGGAAAAATT GCCCCTTGGT
TTAGTGGTGG TTCATAATGG GACTTATGGT CTTTTGTATA GTAACCTGGA TGCGGCGTTA
AGACAACAAG GGATTGATCC GGCTTCCATG CCTCATCCCC ATTATTATGA TCTGCCGGGG
ATTGATTATG TCAAGATTGC TGAGGGTTAT GGTATTCCAG GGATGAGGGT AGACCAAGAA
TCTCAAATAG AAGTGGCTAT TGATAAAATG TTGCACAGCA ATAGTCCCTT TTTGATCGAT
TTAATCCTTA ATTGA
|
|---|
| Protein sequence | MASNLIPWGS RPRTGARAIA EQLAKAGLIG ESDNLLMGNP GSGEHWLYLE LTDYIKMGLA
EPAVGSMLDG ASRITSKPAI AIAHGFVGFS GLQGSVFNAA QRQSPLLVIV GTADSHAHTG
ETHMYADVEG AAKAAGSKYV KNATDPATLL RDLRDAIIEA QIPPFGPVVF IVGSNVANAP
NTEPVIVPKL PNCQLAPPYS EIEILAEELL KAEKPTLLVG DGIARSQAHQ ELLAVAEALG
ADVWASMESE VNFPRIHALY RGNLGHMDDA RGRDLLKAVD CALAVGTPVY QTVFNSKLPL
FSPNTVLAAI NYDPETSLRG HNDITLPIKG DPKRILGMLL TVIQQKQTAT QRDQAKQRLM
LREQEKSALM AQRRTTQLAQ PGVTIAKFGY FLEQRLKDLS DRPIIFNEAL EGAVGLTDYL
ENVNIPGKYF DTSGGSLGEW GGAVGASLIH GRTIVFIGDG GFHYPLQALW NAAQEKLPLG
LVVVHNGTYG LLYSNLDAAL RQQGIDPASM PHPHYYDLPG IDYVKIAEGY GIPGMRVDQE
SQIEVAIDKM LHSNSPFLID LILN
|
|---|
| |