Gene PCC8801_1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1894 
Symbol 
ID7105166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp1972263 
End bp1973156 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content36% 
IMG OID643474955 
ProductAuxin Efflux Carrier 
Protein accessionYP_002372088 
Protein GI218246717 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTTC TTTTACCTGC TATCCTTCCT GTTGCTTTAA TTATTTTCAT TGGTTTTATT 
GCAGGGAGAA CACTTAATCT TAAACTATCT ACCCTTTCTC AATTATCGGT TTATATTTTA
TGTCCGGCGT TAATTGCTGA TAGTTTGTAT CGGACTACTA TCTCTGCTAA AAGTGTTTTA
GATTTATCAC TTGGGGTAGT GATTATTGCT CTAGTTATGT ATTTAATCGC TTGGGGAATC
AGCTATTTTT TTCAGGTATC TTCTCTGACT TATCGAAGTT TAGTCGCTAC GACTGTCCAT
CCCAATAATG GTAATATGGG TTTACCGTTT GTAGACTTTG CCCTCGGTTC TGGTGGGTTA
GAAAGGGCAA TTATTTATAT GATTAGTTCG GCTATTATTA TGTTTGGATT TGCTCCTGCT
ATTTTAACAG GAAGTAGCTT AAAAAAAGGA TTAATTTTAA CCTTAAAACT TCCTCTTATC
TGGGCAATGT TAGCAGGTTT AGCCCTAAGA TTACTAGGGA TCGAACTTCC TTTTAAACTA
GGAGAAGGTA TTCATCTTTT GGGACGCTCA GCAATTCCTA TTGATTTAAT TATTTTAGGA
ATGCAGCTTT CTAATACTCG CTTGACGGTA GCTAAATATG AATTTATTTC AACAATATTG
CGGTTACTAA TTGCTCCAAT TATTGCCTTT TATGTTGGGA AAATGCTCAA TTTAGAGGGT
TTGGATTTAC AAGTTTTAAT TCTACAAAGT GCTATGCCAA CAGCGATTAA TACCTTAGTT
TTAGTAACAG AGTTTGGGGG AGATGCCCCC CGTGTTGCCC GTACTATTGT TGTCACTACA
TTGAGTAGTT TTATTACCTT ACCTCTTGTC TTGTGGGCAG CTACTGGATT TTAA
 
Protein sequence
MSVLLPAILP VALIIFIGFI AGRTLNLKLS TLSQLSVYIL CPALIADSLY RTTISAKSVL 
DLSLGVVIIA LVMYLIAWGI SYFFQVSSLT YRSLVATTVH PNNGNMGLPF VDFALGSGGL
ERAIIYMISS AIIMFGFAPA ILTGSSLKKG LILTLKLPLI WAMLAGLALR LLGIELPFKL
GEGIHLLGRS AIPIDLIILG MQLSNTRLTV AKYEFISTIL RLLIAPIIAF YVGKMLNLEG
LDLQVLILQS AMPTAINTLV LVTEFGGDAP RVARTIVVTT LSSFITLPLV LWAATGF