| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_1842 |
|---|
| Symbol | |
|---|
| ID | 7101773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | + |
|---|
| Start bp | 1936063 |
|---|
| End bp | 1937985 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643474908 |
|---|
| Product | ATP-dependent metalloprotease FtsH |
|---|
| Protein accession | YP_002372041 |
|---|
| Protein GI | 218246670 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACA AGATCTCCCA CAGTCAATCT ATTCATCAAG CAAATCGCCG TCAACCCACT
TCACGAAAAT GGGGACATCT GGTGACTAGT TGGATGCTCA TACAATCGTT ACTTGTGGCT
ACTCCCAGTT GGGGACAAAC CCTAATTCCT TCTGGGAAAG AATCTAAACC CGAAGGTATC
AGCTATAGTC AGTTATTGAA GCAAATTGAA TCAGGAAAAG TCCGTAAAGT AGAAATTGAC
CCAAAATTAC AAAAAGCCAA AGTTACCCTA AAAAATCAAT CTGAACAAGA CCCCCCACAA
GAAGTCCCCC TCTTTAAAAG CAACCTCAAC AACGAATTAA TTGCTAAGCT GCGAGATAAC
AATGTCCCTG TGGATATTCA ACCTTCCGTA GATAATTCCG CCGCGATTAG CCTAGTTGTT
AATTTAATCG TCCTTTTTCT GCTGTTTAGT ATTTTTATTG CCATTATTAG ACGTTCGGCC
AATGCTTCCG GTCAAGCCAT GAATTTTGGT AAATCTCGCG CTAGGTTTCA GATGGAAGCC
AAAACAGGGA TCAGCTTTGA AGATGTCGCT GGTATTGATG AAGCTAAAGA AGAACTGCAA
GAAGTCGTTA CTTTTCTGAA ACAACCTGAA AAATTCACCG CTATTGGCGC AAAAATCCCC
AAAGGCGTAT TATTAGTCGG TCCCCCTGGA ACGGGTAAAA CTCTACTCGC TAAAGCCATT
GCAGGAGAAG CGGGGGTTCC TTTCTTTAGT ATTTCCGGTT CCGAATTTGT GGAAATGTTC
GTTGGGGTTG GGGCTTCGCG GGTGAGAGAT TTGTTCAAAA AAGCCAAAGA AAACGCCCCT
TGTTTGATTT TTATCGATGA AATTGATGCC GTTGGTCGTC AACGGGGAGT CGGTTATGGG
GGAGGCAATG ATGAACGGGA GCAGACCTTA AACCAATTAT TGACGGAAAT GGATGGGTTT
GAAGGAAATC GCGGAATTAT TGTTATTGCT GCCACTAACC GTCCTGATGT CCTTGATAAA
GCCTTATTGC GCCCTGGACG CTTTGATCGG CAGGTAGTGG TCGATTATCC CGATCTTAAG
GGTCGTCAGG GCATTTTAGA AGTTCACGCC CGCAATAAAA AAGTTGATCA AGAAGTCTCT
TTAGAAGCGA TCGCTCGTCG GACACCAGGC TTTACGGGGG CAGATTTAGC CAATGTCCTC
AATGAAGCAG CCATTTTTAC CGCCAGACGG CGCAAAGAAG CCATTACCAT GACCGAGATT
AACGATGCGA TTGATCGCGT TGTGGCCGGG ATGGAAGGAA CGCCCCTTGT GGACAGCAAG
AGTAAACGGT TAATTGCCTA TCATGAAATT GGCCACGCAG TGGTGGGGAG TTTGCATGAG
GGCCACGATG CCGTCGAGAA AGTGACCCTG ATTCCTCGCG GACAAGCAAA GGGGTTAACC
TGGTTTATGC CCGATGAAGA ATATGGGTTA GTGACGCGAA ATCAATTATT AGCGAGAATT
GCCGGATTAT TAGGTGGAAG GGCAGCCGAA GAGGTGATTT TTGGCGAAGA TGAAGTCACA
ACGGGGGCAG GGAATGATAT CGAAAAAGTG ACCTATTTAG CGAGGCAGAT GGTAACGCGC
TTTGGGATGT CAGAATTGGG GTTAGTTGCC CTAGAGAGTG ATAATGATGA TAGTTATGTG
GGGCTTGATG GTAGTCGGCG ATCGGATTAT TCAGACGAGA TTGCCACTAA AATTGATCAT
CAGGTGCGTT CTATTGTTGA TGATTGTCAC AATTACGCTC AAAAAATTAT CCAAGAAAAT
CGCATTGCTA TTGATCGCTT AGTGGATATT TTAATTGAAC AAGAAACCAT TGAAGGAGAA
CAATTTCGTC AACTGCTAGA AGAATTTCGC CTAAAGGTTG ATAAAACCTT ATTAAAGGTT
TAG
|
|---|
| Protein sequence | MSNKISHSQS IHQANRRQPT SRKWGHLVTS WMLIQSLLVA TPSWGQTLIP SGKESKPEGI
SYSQLLKQIE SGKVRKVEID PKLQKAKVTL KNQSEQDPPQ EVPLFKSNLN NELIAKLRDN
NVPVDIQPSV DNSAAISLVV NLIVLFLLFS IFIAIIRRSA NASGQAMNFG KSRARFQMEA
KTGISFEDVA GIDEAKEELQ EVVTFLKQPE KFTAIGAKIP KGVLLVGPPG TGKTLLAKAI
AGEAGVPFFS ISGSEFVEMF VGVGASRVRD LFKKAKENAP CLIFIDEIDA VGRQRGVGYG
GGNDEREQTL NQLLTEMDGF EGNRGIIVIA ATNRPDVLDK ALLRPGRFDR QVVVDYPDLK
GRQGILEVHA RNKKVDQEVS LEAIARRTPG FTGADLANVL NEAAIFTARR RKEAITMTEI
NDAIDRVVAG MEGTPLVDSK SKRLIAYHEI GHAVVGSLHE GHDAVEKVTL IPRGQAKGLT
WFMPDEEYGL VTRNQLLARI AGLLGGRAAE EVIFGEDEVT TGAGNDIEKV TYLARQMVTR
FGMSELGLVA LESDNDDSYV GLDGSRRSDY SDEIATKIDH QVRSIVDDCH NYAQKIIQEN
RIAIDRLVDI LIEQETIEGE QFRQLLEEFR LKVDKTLLKV
|
|---|
| |