| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_1746 |
|---|
| Symbol | |
|---|
| ID | 7101818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 8801 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011726 |
|---|
| Strand | - |
|---|
| Start bp | 1827925 |
|---|
| End bp | 1830228 |
|---|
| Gene Length | 2304 bp |
|---|
| Protein Length | 767 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643474814 |
|---|
| Product | Tetratricopeptide TPR_2 repeat protein |
|---|
| Protein accession | YP_002371949 |
|---|
| Protein GI | 218246578 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3063] Tfp pilus assembly protein PilF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGGCA TCGGTAAGAC AGAATTGGCT TTACAGTATG GTTGGAAGGA ATGGCACAAT
AAAACCTATC CAGGGGGGAT ATGTTGGGTA AATGGGGCAG ATAGTGACCC AGGACTCAAT
ATTTTATCGT TTGCGAGGCA ATATCTCAAG TTAACTATAC TCGATGAGGG GACATTAGCG
GAAAGGGTAG CTTATTGTTG GCGCAATTGG TTAGCGGGTG ATACCCTGAT TATTTTTGAT
GATGTGGGAG ATTATCAGCG AATTAAGGAC TTTTTGCCCC CAAAACAAGA GAAACGATTT
AAGGTACTCA TTACTACCCG TCGGGAATTT TTAGCGGGGA CAATAGAGAA TTATGCTGTA
GAAGTCTTAG ATGAAGAGCC AGCCGTTGAT TTATTGAGGT CTTACGTTAC AGATGGCAGA
ATTGACGTAG AAATTGAGCA AGCTAAGCTA TTATGTCGAG ATTTAGGTTA TTTACCTCTA
GCGTTAGAGT TGGTAGCGCG GTTATTGAAA CGGCGTAAAG ATTGGACTTT AGGCAAAATT
AGGGATAAAT TAGCAGAAAA AGGCTTAGAT GAAAAAATTT TACAGAGAGA TCCCAAGTTT
GCTGATGAAA TGACGGCGCA ACGAGGTGTT AAGGCTGCTT TTGACCTGAG TTGGCAAGAA
TTGGATAGTG AACCAGCAGC GCAAAAATTA GCACTCTATT TAAGTTTATT TGCCCTTGCA
CCGTTTCCCA AGTCTCTTAT TGAGGGTTTA TTCCCTGATG AGGATAAGGA TGAGATAGAG
GAATGGTTAA CCGATAGCTT GGTTGACCTT AATTTGGTGC AATGTTTAGA TAATGGATGG
TATGAACTGC ATACTCTGCT ACGTCGCTAT TTTCGTGATA AATTGGAGCT TTCTGCCGAT
GTTGAGACAG CTAAAAAGGC TTATTGCCGT GCTATAGTAC CCATCGGGAA AGCAATACCA
GAGACTACCA CCCTAGAAGA CATAGAACGG TTTGAACCTC TCATCCCTCA CTTGACCATT
GCCGCAGATG AGTTAGTAAC ATGGGTAAAA GATGGTGATA TTTTGGGGTT ATTTACTGGT
TTAGGTTCAT TTTATCGGGG ACAGGGACGC TATCAAGATG CAGAACCCTA TCTTGAACAC
TGTCGTATCC TAACACGACA ACGGTTAGGG GATAATCACC CTCATGTTGC AGTTTCCCTC
AATAATTTAG CATTACTCTA CGATTCCCAA GGAAGGTATT CAGAAGCTGA ACCCCTCTAT
CAAAAAGCTT TGTCCCTTTA TAAACGTCTG TTAGGGAATA ATCACCCTAA TATGGCACAA
TCCCTCAATA ATTTAGCAGA ACTCTACCGT AACCAAGGAA GATATGCAGA AGCAGAACTC
CTCCATCAAG AAGCTTTGTC CCTGAGAAAA CGTCTGTTAG GGGATCATCA CCCTGATGTC
GCACTATCCC TCAATAATTT AGCAGCACTT TACTATTCCC AAGGAAGGTA TTCAGAAGCT
GAACCCCTAT TAAAAAAAGC CTTGTCCCTT TATAAACGTC TGTTAGGGGA TAATCACCCT
CATATCGCAT CTTCCCTGAA TAATTTAGCA GGACTCTATG ATTCCCAAGG AAAGTATGGA
GAAGCTGAAC CCCTCTATCA ACAAGCTTTG TCTCTGAGAA AACGACTGTT AGGGGATCAT
CACCCTGATG TCGCACAATC CCTCAATAAT TTAGCAGAAC TCTACCGTAA CCAAGGAAGG
TATGGAGAAG CAGAACCCCT CTATCAACAA GCTTTGTCTC TGAGAAAACG ACTGTTAGGG
GATCATCACC CTGATGTCGC ACAATCCCTC AATAATTTAG CAGAACTCTA CCGTAACCAA
GGAAGGTATG GAGAAGCAGA ACCCCTCCAT CAAGAAGCTT TGTCCCTGAG TAAACGACTG
TTAGGAGATA ATCACCCTGA TGTCGCACAA TCCCTCAATA ATTTAGCATT ACTCTACAAT
TCTCAAGGAA GGCATGGAGA AGCAGAACCC CTCCATCAAG AAGCTTTGTC TCTGAGAAAA
CGACTGTTAG GGGATAATCA CCCTGATGTC GCACAATCCC TCAATAATTT ATCATTACTC
TACGATTGCC AAGGAAGGTA TGCAGAAGCT GAACCTCTCT ATCAAGAAGC TATCGCTATT
GCACTTCGTA CCCTGGGGGA AAATCATCCC CATACCCAAA CTATTTACAG GAATTATCTA
TTGATGCTAT CAAAATTACC CGATGAAGAA TTAGCGCAAC GGTTTCCTGC GGAGTTGGTG
GAGATAGTGC GAGGGTTGAG ATAA
|
|---|
| Protein sequence | MGGIGKTELA LQYGWKEWHN KTYPGGICWV NGADSDPGLN ILSFARQYLK LTILDEGTLA
ERVAYCWRNW LAGDTLIIFD DVGDYQRIKD FLPPKQEKRF KVLITTRREF LAGTIENYAV
EVLDEEPAVD LLRSYVTDGR IDVEIEQAKL LCRDLGYLPL ALELVARLLK RRKDWTLGKI
RDKLAEKGLD EKILQRDPKF ADEMTAQRGV KAAFDLSWQE LDSEPAAQKL ALYLSLFALA
PFPKSLIEGL FPDEDKDEIE EWLTDSLVDL NLVQCLDNGW YELHTLLRRY FRDKLELSAD
VETAKKAYCR AIVPIGKAIP ETTTLEDIER FEPLIPHLTI AADELVTWVK DGDILGLFTG
LGSFYRGQGR YQDAEPYLEH CRILTRQRLG DNHPHVAVSL NNLALLYDSQ GRYSEAEPLY
QKALSLYKRL LGNNHPNMAQ SLNNLAELYR NQGRYAEAEL LHQEALSLRK RLLGDHHPDV
ALSLNNLAAL YYSQGRYSEA EPLLKKALSL YKRLLGDNHP HIASSLNNLA GLYDSQGKYG
EAEPLYQQAL SLRKRLLGDH HPDVAQSLNN LAELYRNQGR YGEAEPLYQQ ALSLRKRLLG
DHHPDVAQSL NNLAELYRNQ GRYGEAEPLH QEALSLSKRL LGDNHPDVAQ SLNNLALLYN
SQGRHGEAEP LHQEALSLRK RLLGDNHPDV AQSLNNLSLL YDCQGRYAEA EPLYQEAIAI
ALRTLGENHP HTQTIYRNYL LMLSKLPDEE LAQRFPAELV EIVRGLR
|
|---|
| |