Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_1668 |
Symbol | |
ID | 7104958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | - |
Start bp | 1751527 |
End bp | 1753542 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643474739 |
Product | Exoribonuclease II |
Protein accession | YP_002371875 |
Protein GI | 218246504 |
COG category | [K] Transcription |
COG ID | [COG0557] Exoribonuclease R |
TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGAAAAAG GAAAACTCAT CGAAATTAGG GTACAAGGAG AACGTCGCCT AGCCGTCGTT GATCGTCCAG AAGGAAAAAA AGATTGGATG GTCATCGATG CGGGGGGTCA ATCTCACAAA ATTCGACCCC AACGGGTAGA ATACGAAGTC GAGGGAGGTC CCTATAGTCC TCAAGAGATC CCCCAATTTC TGCGAGACGT GGAACCCTAC CTTGATCCAT CTAGTTTAGA AGTCGCTTGG GAATTACTGG TAGAAGACGC AGAAGGAGTC ACGCCAGCCG GACTGTCCCA ATTACTATTT TCAGCCAAAA CCCCCCCTCA ATGCTACGCC GCCCATAGCC TACTGTCTGA GGATAAAATT TACTTCAAGA AAAAAGGCGA TCGCTACGAA CCCCGTCCCA GTAGTCAAGT CGAAGAAATT AAACATCAAC TCGACGTTGA ACAGCATCGT CAGCAAGAAA AAGCGCAATT TTTTACTAAG ATAAGACAAG CGATCGCGCA AGAACTTGTT AACTGGACAG ACAGCGATCG CAACCGTTTG GAGTCCCTCG AACGCTTGAT CTTGCAACCG GAACAAACCC ACCGGAATGC CCAAGAATTA CTCAGTGAGA TCGGGCGATC GCAAACCCCA GAAGCCGCCT TTGAACTCCT AGTAGAATTA GGGTGGTGGA GTCGCCACGA AAACCTATTT CTACGGCGCA GTTCCTATCC TATGCAGTTT CCCAAAAAGG TACTTGATGT GGCCCAATCC TTTTTAACCC TTCCTCCCCC CGATCAAGAC GAAGATCGCC TGGATTTAAC CCATCTTAAG GTCTATACCA TCGATGATGA AAGTACCGAA GAAATTGACG ACGGGTTAAG CGTCGAGTTT CTAAGCGACG ATCAGGTGAA ACTGTGGATT CATATTGCTG ACCCCACTCG GTTAGTTTCA CCAGGAGACG AATTAGACCT AGAAGCCAGA AGACGGACGA CCACCCTCTA TTTACCCACC GGGATGATTT CCATGTTTCC CGTGGAATTA GCCACCGGTC CAATGAGTTT AATTCAAGGG AAAATCTGTC CTTCCCTCAG TTTTGCTGTG ACCCTCGACA ATGAGGGGGC AGTGTTGGAC TATTCTATCC ATGCCAGTCT TATTAAACCC ACCTACCGCC TCACTTACTA CGATGTGGAT GAAATGCTGC AATGGGGCAT TAAAAATGAA CCAGAGATTA GGATTTTGGC TGAAGCTGCT AAAAAACGCC ATCTGTGGCG ACAATCCCAA GGAGCCATTA ATATTAAGAT GCCGGAGGCG GTGATTAAGG TCAAATCGGA AGACGAGATC GTTATCGAAC TAATTGAGAG TTCACGATCG CGCCAATTGG TAGCAGAAAT GATGATTTTA GCGGGAGAAG TGGCTGGACG ATACTGTCAA GAACATGGCT TACCCGTTCC CTTCCGGGGT CAACCTCAAC CCGAATTACC CCCCGATGAG GAATTATTGT TATTACCGCC GGGTCCTGTA CGAGCCTGTG CTTTGCGTCG CTGTATGCCC CGCAGTGAAA TTGGGACGAT ACCGAACCGT CACGCTAGTT TAGGGTTAAA TACTTATACA CAAGTGACCT CTCCGATTCG GCGTTATACG GATTTATTAA CCCATTTTCA GCTTAAAGCC CATTTACGGG GGGATAAGTT GCCCTTTTCC CTCGATATGA TGCAGCAAAT CCTCTATGGT GTTACCTTAT CAGCCCAAGA AGCGTCCTTA GTGGAACGGC AAACCAATCG TTATTGGGGG TTAGAATTTT TACGGCGCAA TGCGGATGAG ATTTGGCACG GCATTGTGTT ACGGTGGTTG CGAGAAGATG AAAATTTAGG AATACTATTA TTAGAAGAAT TGGGGTTAGA GTTGCCCCAT CGCTTTGAAA AGGCGGTTTC GTTAGGCGAT CGCCTGAATG TTCAAGTCAG TTGTGCTGAT CCCCATCGGG ATGAAATTCG GTTTCGAGAA ATGCTACAAC ACGAAGTTCA CTCAAGTGCC ATTTAA
|
Protein sequence | MEKGKLIEIR VQGERRLAVV DRPEGKKDWM VIDAGGQSHK IRPQRVEYEV EGGPYSPQEI PQFLRDVEPY LDPSSLEVAW ELLVEDAEGV TPAGLSQLLF SAKTPPQCYA AHSLLSEDKI YFKKKGDRYE PRPSSQVEEI KHQLDVEQHR QQEKAQFFTK IRQAIAQELV NWTDSDRNRL ESLERLILQP EQTHRNAQEL LSEIGRSQTP EAAFELLVEL GWWSRHENLF LRRSSYPMQF PKKVLDVAQS FLTLPPPDQD EDRLDLTHLK VYTIDDESTE EIDDGLSVEF LSDDQVKLWI HIADPTRLVS PGDELDLEAR RRTTTLYLPT GMISMFPVEL ATGPMSLIQG KICPSLSFAV TLDNEGAVLD YSIHASLIKP TYRLTYYDVD EMLQWGIKNE PEIRILAEAA KKRHLWRQSQ GAINIKMPEA VIKVKSEDEI VIELIESSRS RQLVAEMMIL AGEVAGRYCQ EHGLPVPFRG QPQPELPPDE ELLLLPPGPV RACALRRCMP RSEIGTIPNR HASLGLNTYT QVTSPIRRYT DLLTHFQLKA HLRGDKLPFS LDMMQQILYG VTLSAQEASL VERQTNRYWG LEFLRRNADE IWHGIVLRWL REDENLGILL LEELGLELPH RFEKAVSLGD RLNVQVSCAD PHRDEIRFRE MLQHEVHSSA I
|
| |