Gene PCC8801_1617 details

Gene Information

• Locus tag: PCC8801_1617
• ID: 7102365
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 1693859
• End bp: 1694548
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 643474688
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_002371824
• Protein GI: 218246453
• COG category: [R] General function prediction only
• COG ID: [COG0300] Short-chain dehydrogenases of various substrate specificities

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGTTAG AGAAAAGGCA AATTCTTGTT GTAGGAGCTA GTCGGGGTAT TGGTGCTGCT 
GTTGCTCAAC ATTTTGCTCA AAAAAGTGAG AATGTCATCT CTGTTTCAAG AAGTCAACCT 
ATTGCAGGCA AGTGGATTCA AGCGGATATT TCCACAGCAC AAGGAATACA GTCAGTCGTT 
GATCAGGTTG GCGAATCTCG ATTGGATGCA CTGCTATTCA TGGGAGGAGT GTGGGAAGAT 
GGCGCATTTA CAGCTCAATA TGACTTCTTG CAAAGCTCTG ATCAAGAAAC TCGTTATGTG 
ATAGCGGTCA ATACAATTGC TCCTATCGAA CTCACTAAAA AACTCACTAA AAATCTTGTT 
AAATCAGACA ACCCAAGAAC TATATTTATT GGCTCATTAT CTGGTCTAGA TAACGCCGCG 
TCGATCGAGG TAGCTAATAC AGCATCAAAA TTTGGGTTAA GAGGCGCAGC ACAGGCATTA 
AGTATAGCTC TGTATGATTA CAAGATTGGT GTTACAATTA TTAATCCTGG AAATGTCGCC 
ACTGAAGAAG TGCTTGCAGA TATAAAAGAA GGAAGATTTG GGCAGCAAGT TCCGATTCCT 
CTTGCGGATA TAATTTCTTC AATTGATTGG ATTCTAACGC TCTCAAATGC TGTAAACATC 
GCAGAGATCA ATATGCAACA GAAAGGCTGA 

 

Protein sequence

MQLEKRQILV VGASRGIGAA VAQHFAQKSE NVISVSRSQP IAGKWIQADI STAQGIQSVV 
DQVGESRLDA LLFMGGVWED GAFTAQYDFL QSSDQETRYV IAVNTIAPIE LTKKLTKNLV 
KSDNPRTIFI GSLSGLDNAA SIEVANTASK FGLRGAAQAL SIALYDYKIG VTIINPGNVA 
TEEVLADIKE GRFGQQVPIP LADIISSIDW ILTLSNAVNI AEINMQQKG