Gene PCC8801_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1612 
Symbol 
ID7102362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp1688717 
End bp1689931 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content43% 
IMG OID643474684 
Producttype II secretion system protein 
Protein accessionYP_002371820 
Protein GI218246449 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTACAT TTGTTGCTCA AGTTAAGGAT ATCAAGGGCA AAATCTCTAA CGCTAAAGTT 
CAAGCGGCCT CTCCTGAACA AGCGCGGATG ATGCTCCGAC AACAATATCC CGCTATTGGT
CGCATTAAAA AGTCTGGGAT GGATATTGAT CTGTCTGCCA TTGAATTAGC CTTAAGTAAC
GTTAAAGTTA AGGATAAAGC AGTTTTCTCT CGTCAATTTT CCGTGATGAT CAACGCGGGG
GTTGCCATTG TTCGATGTTT AGGCATTTTA TCAGAACAAG CGAGTAATCC CAAACTCAAA
AAAGCCTTAG GTGCTATTAG TGCTGAGGTA CAGCAAGGGG TCAGCCTCTC TGAAGCCATG
GGAAAACATC CTGAGTGCTT TGATGAACTC TATGTCAGTA TGGTCGAAGC CGGGGAAATG
GGGGGGGTAC TTGATGAAGT GCTTAACCGT CTGTCAAAAC TGCTTGAAGA TATGGCCAGA
CTGCAAAACC AAATTAAATC TGCGATGGCT TATCCCGTAA CAGTCGGTGT TTTAGCGGTG
TTAGTTTTCT TTGGGATGAC CATCTTCTTG ATTCCCGTTT TTGCCAAGAT TTTTGAAGAT
TTAGGCGCAG AACTGCCTAT GTTGACCCAA ATCATGCTCA ATATTAGTGG TATTATGAGA
AGTTGGAAAA TTTTGATTCC CATTGGCACA ATTATGGGAG GAAGTTTTGC CATCACTCAA
TATTACAGAA CACCAGCAGG ACGGTTACAA ATCGATGCTC TGATGTTGAA ACTTCCCTTA
TTTGGGGATT TGAATGAAAA GTCGGCTGTA GCACGATTTT GTCGGGTTTT TGGGACGTTA
ACCCGTTCTG GGGTTCCTAT TCTTTCTTCC CTAGAGATTG TTTGTAATAC TGTGGGAAAT
AAAGTCATTG CCAATGCCAT TGATGCCGCT AAAAGTGAAA TTCAACAAGG GGGAATGATG
AGTTTAGCGT TACAACGGGC TAATGTTTTT CCGCAGTTGG CTATTCAAAT GATTAGTATC
GGTGAAGAAA CGGGAGAACT CGATGCGATG ATGATGAAAG TGGCAGATTT CTACGAAGAT
GAGGTGGAAC AAGCCATCAA GGCTATGACG AGTATGCTAG AACCGTTGAT GATGGTGGGT
ATCGCTGGTA TGGTTGGGGT GATTCTCCTC TCTATGTATT TACCCATGTT CAAAATCTTC
GATCAACTGG CTTAA
 
Protein sequence
MPTFVAQVKD IKGKISNAKV QAASPEQARM MLRQQYPAIG RIKKSGMDID LSAIELALSN 
VKVKDKAVFS RQFSVMINAG VAIVRCLGIL SEQASNPKLK KALGAISAEV QQGVSLSEAM
GKHPECFDEL YVSMVEAGEM GGVLDEVLNR LSKLLEDMAR LQNQIKSAMA YPVTVGVLAV
LVFFGMTIFL IPVFAKIFED LGAELPMLTQ IMLNISGIMR SWKILIPIGT IMGGSFAITQ
YYRTPAGRLQ IDALMLKLPL FGDLNEKSAV ARFCRVFGTL TRSGVPILSS LEIVCNTVGN
KVIANAIDAA KSEIQQGGMM SLALQRANVF PQLAIQMISI GEETGELDAM MMKVADFYED
EVEQAIKAMT SMLEPLMMVG IAGMVGVILL SMYLPMFKIF DQLA