| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PCC8801_1610 |
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| Symbol | |
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| ID | 7102360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 8801 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011726 |
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| Strand | + |
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| Start bp | 1685453 |
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| End bp | 1687474 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643474682 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_002371818 |
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| Protein GI | 218246447 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTTATT CGTCTTCCAC CAAGCGATCG CGTGCAGTCG CCCTGAGAAA CTACTTCTCC
CCCTTTGGGA ATAAGTTGGT TGAAACCGGA TACATCGCAC CCGATCAAAT GCAGCAAGCC
CTAGTTGAAA CTCGTAAAAC TGGACTTCCC CTTGTCGAAG TGGTACAATC GCTAACCGGT
CGTCAACTGC CCCCTGATTT ACAACGACAA TATAAAAAAC ACCATTTATT TGAACTAAAA
ATCCTCTATG GAGTAGATTC AGTCGATCCC GAAATTAGTC CCGTCGCGGA TCGACAAATG
GCCGAACTGA TTGGCACTCT AATCTCTTTT GACATCTGTC GTCGTCATAA ACTGTTACCT
ATTTCTAAGC ACGAAGGAGA TCCCCCATAT ATCTTAGTGG CTATGGTTGA TCCCGACAAC
TTAGCCGCCC AAGACGATCT CAATCGCATT GTAAGATCTA AAGGACTCAA CCTCAAACGC
ATGGTCATTA CCCAAGAAGA TTATGACCGA CTCCTAGAAC AATATCATGA ATTGCAAACA
GAACTAGACC AAGAAAAAGA ACGTCTAGAT AAAGAAAAAG CCCTGGAAAA ACTGGCTGAC
ATCTCCAGTT TAGTCGATAA TATGGACAAT ATAGGGGAGG TAAATGATGA CGATGCCGAT
TCCCTAGATG CCAATGAAGC TAACAACGCC CCTATTATTA ACCTAGTTAA CAAAATTCTC
GCCAAAGCCC TACAAGAAGG GGTATCGGAT ATCCACGTCG AACCCCAAGA AGAATCCCTA
CGCATTCGTT TTCGTAAGGA TGGGGTCTTA CAACAAGCCT TTGATCCCCT GCCCAAAAAA
ATCATTGCAG CAGTGGTAGC ACGGTTTAAG ATTATGTCAG ACTTAGACAT TGCCGAACGC
CGTCTGCCTC AAGATGGAAA AATCCGCCGC ATCTACCAAG GACGCAAAGT AGACTTTCGG
GTGAATACCC TACCCAGTCG CTACGGCGAA AAAGTCTGTT TACGGATCTT AGATAACTCT
GCTACCCAAC TGGGATTAGA TAAATTAATC ACCAATCAAG AAACCCTACA AATTGTCCGC
GACTTAGCCA GTCGTCCCTT TGGCTTAATT TTGGTAACAG GACCGACGGG AAGTGGAAAA
TCCACCAGTT TGTACTCCGT GTTAGCCGAA CGCAACAACC CAGGGGTTAA CATTAGTACC
GCCGAAGATC CCATTGAATA CTCCTTACCC GGCATTACCC AAGTCCAGGT GATTCGGGAA
AAAGGCATGA ACTTTGCTTC TATTCTACGC GCCTTTATGC GACAAGATCC CGATGTCATT
CTGGTGGGGG AAACGCGAGA CGTAGAAACC GCTAAAACCG CCATTGAAGC TGCCTTAACG
GGTCACTTAG TCTTAACCAC CCTCCATACT AACGATGCCG CCGGTGCGAT CGCCCGTCTC
GATGAAATGG GAGTAGAACC CTTCATGATT TCTGGTGCCC TCCTCGGAGT CTTGGCGCAA
AGGTTGATGC GACGAGTTTG TACTGAGTGT CGGGTTCCCT ATAACCCCAC TAAAGCTGAA
CTCGCCCGTT TTGGTCTATC GGCCTCCAAT CAAGAAGAAA TCACTATCTA CAAAGCCAAT
AAACTTACCC CAGAGGAAAT TACTGAGGCT AAGACCAAGG GAAGCCTTTG TGCCAAATGT
AATGGTAGCG GTTATAAAGG ACGGGTCGGG GTCTATGAAG TGATGCGCAA TACCGAAAAG
ATTCAAAGTC TAATCAACCA AGGGGCGACG ACAGACCGCA TTAAAGAAGC AGCCGTTGAA
GAAGGGATGG TAACTATCCT TGCATACAGT TTGCAATTGG TGCAAGAAGG CTATACCACC
CTCGAAGAAG TGGAACGGGT GACGTTTACC GACACGGGAC TCGAATCGGA ATTAAAAGCA
AAACGCAAGA GTTCCCTCGA ATGTCAAACC TGCAACGCCG AATTACAGCA AGAATGGTTG
GACTGTCCCT ATTGCCTCAC CCCCAGATTT ATTAACAATT AA
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| Protein sequence | MTYSSSTKRS RAVALRNYFS PFGNKLVETG YIAPDQMQQA LVETRKTGLP LVEVVQSLTG
RQLPPDLQRQ YKKHHLFELK ILYGVDSVDP EISPVADRQM AELIGTLISF DICRRHKLLP
ISKHEGDPPY ILVAMVDPDN LAAQDDLNRI VRSKGLNLKR MVITQEDYDR LLEQYHELQT
ELDQEKERLD KEKALEKLAD ISSLVDNMDN IGEVNDDDAD SLDANEANNA PIINLVNKIL
AKALQEGVSD IHVEPQEESL RIRFRKDGVL QQAFDPLPKK IIAAVVARFK IMSDLDIAER
RLPQDGKIRR IYQGRKVDFR VNTLPSRYGE KVCLRILDNS ATQLGLDKLI TNQETLQIVR
DLASRPFGLI LVTGPTGSGK STSLYSVLAE RNNPGVNIST AEDPIEYSLP GITQVQVIRE
KGMNFASILR AFMRQDPDVI LVGETRDVET AKTAIEAALT GHLVLTTLHT NDAAGAIARL
DEMGVEPFMI SGALLGVLAQ RLMRRVCTEC RVPYNPTKAE LARFGLSASN QEEITIYKAN
KLTPEEITEA KTKGSLCAKC NGSGYKGRVG VYEVMRNTEK IQSLINQGAT TDRIKEAAVE
EGMVTILAYS LQLVQEGYTT LEEVERVTFT DTGLESELKA KRKSSLECQT CNAELQQEWL
DCPYCLTPRF INN
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