Gene PCC8801_1351 details

Gene Information

• Locus tag: PCC8801_1351
• ID: 7103050
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 1411865
• End bp: 1412479
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 643474432
• Product: pseudouridine synthase
• Protein accession: YP_002371569
• Protein GI: 218246198
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases
• TIGRFAM ID: [TIGR00093] pseudouridine synthase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATGAAT ACATTTTATT TAATAAACCT TACGGAGTTC TATGTCAATT TACCGATACA 
GATAACCCCA ATTCTCCCCG TCCAACCCTA AAAGATTATA TTCCTCTTCC TGATATTTAT 
TCCGTGGGGA GACTGGATTT TGACAGTGAA GGATTGCTAT TATTAACGAA TAATGGACGC 
TTAAAACATC GTCTTTCCCA TCGAGAATTT AGTCATCCTC GTACCTATTG GGTGCAAGTC 
GAACGGATTC CCGATGAAAT CGCCCTTGAT CGGTTACGTC AAGGCGTACT AATTAAGGAT 
TATTGTACCC GTCCAGCGCA AATCAAACTG TTAGCAACGG AGCCAAATTT ATCACCCCGT 
AATCCCCCTA TTCGTTACCG TAAAACGGTT CCCACAGCTT GGCTAGAAAT AACCTTAACG 
GAGGGAAGAA ATCGACAAGT CAGACGTATG ACGGCCGCTA TCGGCTATCC TACTTTACGA 
TTGATTCGGA TCTCGATGGG GTTTAAAATA GGGAAAACTT TAGAAAAATT GAGCTTAGGG 
GACTTAAAAC CGGGAGAATG GCGGGAAGCA ACCCAGTTAG AAAGACATAG CTTAGAGACT 
CTTACTTATG GCTAA 

 

Protein sequence

MYEYILFNKP YGVLCQFTDT DNPNSPRPTL KDYIPLPDIY SVGRLDFDSE GLLLLTNNGR 
LKHRLSHREF SHPRTYWVQV ERIPDEIALD RLRQGVLIKD YCTRPAQIKL LATEPNLSPR 
NPPIRYRKTV PTAWLEITLT EGRNRQVRRM TAAIGYPTLR LIRISMGFKI GKTLEKLSLG 
DLKPGEWREA TQLERHSLET LTYG