Gene PCC8801_1311 details

Gene Information

• Locus tag: PCC8801_1311
• ID: 7102202
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: -
• Start bp: 1365581
• End bp: 1367491
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 643474394
• Product: MscS Mechanosensitive ion channel
• Protein accession: YP_002371531
• Protein GI: 218246160
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3264] Small-conductance mechanosensitive channel

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTATTGCC TGTCTTGGTT CTCTGAAGGC TCAAAATTGA TTTTCTTAGG ATTATTTGCT 
TTAATTTTGG CTATTTCTCC TATTTCAATT TTGGCTCAAA ATCCTATTCT CAACTCTACA 
GAAAAAGCTC CCATTGTTGT CGATGGGAGA GTGTTATTTG AAGTGGGATC AATTAGCAAT 
TTTAGCGCAC AACAGCGAGC TAGTATTATT AATGATATCT TAGCCGAAGA AGTGCGATCG 
CCTGACCCCG TGGATGTGGT TATCTTTGAT GAAAATCAAC GAACGGTTAT TCGTAATCAA 
GCTACAAAAC GTCATTTATT GACCGTGACT TCAGCCGATG TTATTGCAGG AAGTAATACC 
TTTGAACAAG CTCTTGTTTG GAAAAAGTAC CTAGAAAGAT CCTTACAACA AGCTCAATTG 
CAGAGAACAT CTGAGTATTT ACGTCAATTT AGCTTATTAA GTATCGCAGC GATTTTAGGA 
GCGATTCTCG GCCATGGAGG CTTGATTTTA CTGCGAATTT GGGGTGAACG AAACTGGCTT 
CGCAGTTGGA GTCATCCCAG TTCCCCTTTG TATACCTGGC AAGGAATTGT CAGACCTTTA 
TGGCGCATTT TTATCATCGG AACTCCCCTA ATTCTTTGGT TAACAGCAAT TGGCTATATT 
GGCTATCTGT TACCCCAAGC CAGAAGCGCA CTTTACCAAA TACTGATGTT TTTAGGACAA 
CCTATTTTTG TCCTCGGTAA AAATAGCTAT TCGGCTACCC AATTACTCTT ACTTTTGTCC 
TTAACGGTTG GACTATGGTT TTTAGTTAAA GGGTTGGTTC GTTTTTTAAA ATCCTATCTT 
TTAGAACGTT TAGAAACTAG CCAAAGTGTT CAAGATGTTG TCGGGATTTT AACCCAATAT 
ATCCTGCTGT TTTTAGGGTT AATTATTTTG CTACAACTCT GGGGACTGGA TATCGGTGCG 
TTAGCTATTT TAGCGAGTGT TTTAGGCGTG GGTATTGGGT TTGGATTACA GAATATTGCT 
AATAATTTTA TTAGTGGTTT AATTATTACT TTAGAGCGTC CCATTCAAGT AGGGGATTTT 
ATTAAGTTAG GGGAATTAGT GGGAACGGTT AAAAATATTG GTGCGAGAAG TACCCAGATT 
AAAACTTGGG ATGGCATCTC GATTATTGTT CCTAATTCGC GTTTTTTGGA AAGTGAAGTC 
ATTAATTGGT CCTATGGTGA TAAAACGTCA GCCATTCGTA TTCCTATCAG TGTTGCTTAT 
GGTTCTGATC TTAAACGAGT TAAGTTGGCT TTATTGCAAA CAGCTAAGGA ACATCCAGAA 
ATTTTAGTGG TTCCCCGTCC TACGGTATTA TTTCAACAGT TTGGAGACAG TGCGTTAAAT 
TTTGAATTAA GGGTTTGGCT CAAAGAACCT CGTAATCAAT TTCGGATTAA AAGTGAACTC 
AATTATGCTA TTGACAAAAA CTTCCGTGAT TATGGTATTG AAATTCCTTT TCCTCAACGG 
GATCTAAATT TGCGATCGCC TCACTTAAAA CCCTTGATTG AAAACATCTT AACATCCACA 
GAAATGATTG ATAAACAGCC TTTAGAAATA CCAGATTTTG AGGAAGAACC TGAGTTAGAA 
TCTTTAGAAG ATCTTTTAAC AGATAGGGAT CTTGAACGGT TGGTTCATGA AATGCGATCG 
CCTCAAGGAT TGGATATTCA AAATCGTCGT TATCGTCTTC ATCTTTATCC TAATTGTTTT 
ATTGGTTCTG AAGCAGTTAA TTGGTTAGTA CAACGTTATA AGTACACTAG GGAAGAAGCC 
GTTGAAGTAG GTCAGATCTT AATGGAAAAA GGCATTATTT GTCATGTTTT AGATCAGCAT 
CCTTTTCAAG ATAGTTATTT ATTTTATCGA TTTTTTCAAG ATGATAAATA A 

 

Protein sequence

MYCLSWFSEG SKLIFLGLFA LILAISPISI LAQNPILNST EKAPIVVDGR VLFEVGSISN 
FSAQQRASII NDILAEEVRS PDPVDVVIFD ENQRTVIRNQ ATKRHLLTVT SADVIAGSNT 
FEQALVWKKY LERSLQQAQL QRTSEYLRQF SLLSIAAILG AILGHGGLIL LRIWGERNWL 
RSWSHPSSPL YTWQGIVRPL WRIFIIGTPL ILWLTAIGYI GYLLPQARSA LYQILMFLGQ 
PIFVLGKNSY SATQLLLLLS LTVGLWFLVK GLVRFLKSYL LERLETSQSV QDVVGILTQY 
ILLFLGLIIL LQLWGLDIGA LAILASVLGV GIGFGLQNIA NNFISGLIIT LERPIQVGDF 
IKLGELVGTV KNIGARSTQI KTWDGISIIV PNSRFLESEV INWSYGDKTS AIRIPISVAY 
GSDLKRVKLA LLQTAKEHPE ILVVPRPTVL FQQFGDSALN FELRVWLKEP RNQFRIKSEL 
NYAIDKNFRD YGIEIPFPQR DLNLRSPHLK PLIENILTST EMIDKQPLEI PDFEEEPELE 
SLEDLLTDRD LERLVHEMRS PQGLDIQNRR YRLHLYPNCF IGSEAVNWLV QRYKYTREEA 
VEVGQILMEK GIICHVLDQH PFQDSYLFYR FFQDDK