Gene PCC8801_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1288 
Symbol 
ID7105056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp1339647 
End bp1340573 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content41% 
IMG OID643474372 
ProducttRNA pseudouridine synthase B 
Protein accessionYP_002371509 
Protein GI218246138 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0130] Pseudouridine synthase 
TIGRFAM ID[TIGR00431] tRNA pseudouridine 55 synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGGAT TTATTGCCTT AAATAAGCCA TCAGGGATGA CTTCCCATGA TTGCGTGGCT 
AGAGTGAGAA AGATTATTAA ACAGAAAAAA GTTGGTCACG GGGGAACGTT AGACCCTGCG 
GCAACCGGAG TTTTACCGAT CGCGGTGGGA CAAGCAACCC GTCTTTTAGC CTTTTTGCCC 
GAAAATAAAG CCTACCGCGC TAAAATTCGC CTAGGAGTCC AAACTGCTAC CGACGATCTC 
GAAGGAGAGG TAATTCGGAC TCAAACTGCA CCTAATTTAA CGTTAGAACA GGTTGAACCC 
TTATTAAGTC AGTTTCTCGG AAGCATTCAA CAAATTCCGC CGATGTATAG TGCTATTCAA 
AAGGATGGTA AGCGGTTGTA TGAGTTGGCC AGACAAGGAG AAACGCCAGA GGTTCCAAGT 
AGAGAGGTTA GAATAGATGA TATTAAGGTA ATTAACTGGT ATTCTAGCAA ATTTCCTGAA 
TTAGAGCTAG ATATTGCCTG TGGTGCAGGG ACTTATATTC GAGCGATCGC CCGTGATTTA 
GGTGCTATGC TCAATATCGG GGGGACTTTG GCCAGTTTAA CCCGTACCGA AAGTTGCGGG 
ATGAAGCTAT TGGATAGTAT TAGTTTAGAA CAGTTAAAAA TAGAGATTGA TCAAGGAACT 
TTTTCCTTAA TTTCTCCAGA TATTGCGTTA CAACATTTAG GTCAAATTAG TTTATCAGAA 
ACCGATACTC AACGATGGTT TCATGGACAA AGAATTGCTC AAGATTTATC TTTATTGTCT 
GATGTTGTCA GGGTTTATGA CAAAGGAGGG GACTTAATTG GAATAGGAAA CCTGGTTAAA 
CATGATAGTT ATCAGGTTTT GAGTCCGAAA ATTGTTTTTA AATTTGATGC AGAGGCACAG 
AGACGCAGAG AGATACTAGA AGGTTAA
 
Protein sequence
MFGFIALNKP SGMTSHDCVA RVRKIIKQKK VGHGGTLDPA ATGVLPIAVG QATRLLAFLP 
ENKAYRAKIR LGVQTATDDL EGEVIRTQTA PNLTLEQVEP LLSQFLGSIQ QIPPMYSAIQ 
KDGKRLYELA RQGETPEVPS REVRIDDIKV INWYSSKFPE LELDIACGAG TYIRAIARDL 
GAMLNIGGTL ASLTRTESCG MKLLDSISLE QLKIEIDQGT FSLISPDIAL QHLGQISLSE 
TDTQRWFHGQ RIAQDLSLLS DVVRVYDKGG DLIGIGNLVK HDSYQVLSPK IVFKFDAEAQ 
RRREILEG