Gene PCC8801_1279 details

Gene Information

• Locus tag: PCC8801_1279
• ID: 7102179
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Cyanothece sp. PCC 8801
• Kingdom: Bacteria
• Replicon accession: NC_011726
• Strand: +
• Start bp: 1325729
• End bp: 1327696
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 643474363
• Product: single-stranded-DNA-specific exonuclease RecJ
• Protein accession: YP_002371500
• Protein GI: 218246129
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0608] Single-stranded DNA-specific exonuclease
• TIGRFAM ID: [TIGR00644] single-stranded-DNA-specific exonuclease RecJ

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAAAT TACCCCGTCA GCGATGGGAA ATTGCTACCC CAAACCCGGA ACAAGTCAAA 
CAACTTATTG AGGCAACAGG ACTATCTCCC TTAATTGCTA AAGTAATTAT TAATCGAGGG 
ATAGACACAG TTAAATCGAC TCAAGTATAT CTCGATCCTG AAGTAGAAAA TCTGCCTTCT 
CCCCTCAAAG AATTTCCCGA TTTAGCCACC AGTATTACCC TTTTACAAGA GGCGATCACA 
ACAGGAGAAA AGATCGCTAT TTGTGGCGAT TATGATGCCG ATGGGATGAC AAGTACTGCT 
CTATTATTAC GCGCTTTTAG TCAATTGGGA GCAGATATTT ATTACGAAAT TCCTAGCAGA 
ATGAAGGACG GTTATGGCAT TAATGAGCGG ATTGTTGAAG CGTTTGCTGA TCAAGGGGTA 
GGTGTTATTC TAACGGTTGA TAATGGCATT TCTGCCTATC AACCGATTCA ACGGGCTATA 
GAATTAGGAC TAACAGTTAT TATTACCGAT CACCACGATC TCCCTGAAAA ATTACCCCCT 
GCGGATGCTA TTTTAAACCC AAAACTATTA CCCGAAAATT CTCCCTATCG GGGATTAGCG 
GGGGTAGGGG TTGCCTATAT TTTAGCGGTA ACAACAGCAC AAAGTTTAGG GATAACTCAA 
GGATTTATTG ACCCTTTATT AGAACTTTTT ACCCTAGGAA CGATTGCGGA TTTAGCTCCC 
TTAATTGGGG TTAACCGACG CTGGTTAAAA CGGGGATTAA GAAGACTTCC TAAATCTCAA 
TTAGCGGGGG TACAGGCATT AATGCAAGTA GCGGGAGTTA GCGAAGAACA AAAACAATTA 
AAACCTGATG ATATTGGCTT TAGATTAGGT CCAAGAATTA ATGCCATAGG ACGGATTGGT 
GATCCTCAAA TGATCATCGA ATTACTAACA ACAGATGATC CGGGGATAGC ATTAGAAAGA 
GCGATGCAAT GTGAACAGAT TAATGCTAAA CGTAAGGCAA TGTGTGAACA AATCGAACTC 
GAAGCGGTTC ATCTAGTGGA AAATACCCCT ATTCCTTGGA AAAAAGATCG CGTTTTAGTT 
GTTGTTCAAT CTAACTGGCA TCATGGTGTT ATTGGCATTG TTGCCTCTCG TTTAGTGGAA 
CGGTATGGGG TTCCGGTTTT TATTGGAACC TATGAAGAAA ATCCTAGTAA AATTAGGGGT 
TCAGCGCGAG GAATTAAAGA GTTTAATATC TTTGAAGCCT TGGATTTTTG TGGGGATTTA 
TTGGGGAAAT ACGGGGGACA TAAGGCGGCT GGAGGGTTTA GTTTATTAGC CAAGAATTTA 
GATCATTTTA AACAGAGATT AAGCACCTTT GCTCATCAAT ATTTAGAACC CCATCATCTC 
AAACCATTAG TCAGTATTGA TGCTGAAGCT AATTTTGATC AATTAACTCC CCTTTTACAT 
CAATCCATTG ATCAACTTCA ACCCTGGGGA ATTGGCAACG AATTTCCTGT TTTTTGGACT 
CCTAATGTTC AGGTTTTAGA ACAAAGAATC GTCGGAAAAA ATCACCTAAA ATTAGTTTTC 
TGTCAAGACA ATAATGAAAA CCAGATGAAA GCCGTTGCTT GGCGATGGGG AGAATATTTT 
CCTCTTCCTA AAAGAGTTGA TATTGCCTAT AAGCTGAAAG AAAATAATTG GAATGGTGAA 
ACGAATATTG AAATAGAGAT TATTGGCATT CGTCTACCTT TATTAGAAAC CAATAGTAAA 
CCCGTTATGT TTGAATACCA AGGTAAAAAG TATTGGTGTA ATTTTTCATC GATTAATAAT 
GAATTAAAAA TCAAAAATGA ACAAGGCAAA GTATTAGCTG TTACGAAGGG ACAGCGTAAA 
GGACTTTTAG GAACAAATCG AGAAACTGCT AAAGAAGTTG ATATTACTCA ACCTCATTAT 
TATCAGTTAA TTAAAGCTGC TATGGGAATT TTAGGGTTAT CTAAATAA 

 

Protein sequence

MMKLPRQRWE IATPNPEQVK QLIEATGLSP LIAKVIINRG IDTVKSTQVY LDPEVENLPS 
PLKEFPDLAT SITLLQEAIT TGEKIAICGD YDADGMTSTA LLLRAFSQLG ADIYYEIPSR 
MKDGYGINER IVEAFADQGV GVILTVDNGI SAYQPIQRAI ELGLTVIITD HHDLPEKLPP 
ADAILNPKLL PENSPYRGLA GVGVAYILAV TTAQSLGITQ GFIDPLLELF TLGTIADLAP 
LIGVNRRWLK RGLRRLPKSQ LAGVQALMQV AGVSEEQKQL KPDDIGFRLG PRINAIGRIG 
DPQMIIELLT TDDPGIALER AMQCEQINAK RKAMCEQIEL EAVHLVENTP IPWKKDRVLV 
VVQSNWHHGV IGIVASRLVE RYGVPVFIGT YEENPSKIRG SARGIKEFNI FEALDFCGDL 
LGKYGGHKAA GGFSLLAKNL DHFKQRLSTF AHQYLEPHHL KPLVSIDAEA NFDQLTPLLH 
QSIDQLQPWG IGNEFPVFWT PNVQVLEQRI VGKNHLKLVF CQDNNENQMK AVAWRWGEYF 
PLPKRVDIAY KLKENNWNGE TNIEIEIIGI RLPLLETNSK PVMFEYQGKK YWCNFSSINN 
ELKIKNEQGK VLAVTKGQRK GLLGTNRETA KEVDITQPHY YQLIKAAMGI LGLSK