Gene PCC8801_1273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1273 
Symbol 
ID7105052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp1319172 
End bp1322444 
Gene Length3273 bp 
Protein Length1090 aa 
Translation table11 
GC content44% 
IMG OID643474357 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002371494 
Protein GI218246123 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAC AAATTATTAA GCAACTTCAA CAAGAAATCG CTACCTTAAA AGCGGTACAA 
CAAGCGACCC TAAAAATCCA ACAAGAATTA CAAGAAAGTC AAGAACGTTG GCAGTTAATT
ATCCAAGCAA CTAATGAAGG AATTTGGGAT TGGAATCTCA GGACTAATGA GCTTTTCATT
TCTCCGCGTT GGAAAGAAAT GTTAGGCTAT CAAGACCAAG AATTACCCAA TCGTTTTGAT
ACCTGGAAAC AGCTATTACA TCCCCAAGAT GTAGAACGAG TCATGGAAGC TGTACAAAAC
CATCTAGAAG GTCAAACAAA CCATTATCAA ATTGAATTTC GACTGAGGTG TCAAGACGGT
AATTATAAAT GGATTTTATC CAAGGGAAAA GCCCTTTGGA ATAGTGCAGG AAAAGCGATC
CGTATGGTCG GTTCCCACAG TGATATTAGC GATCGCAAAG AAGAACAAAT CCTACTACGT
TCCCTAATTG ATTCTATTCC TGACCTCATC TTTTGTAAAG ATGCCCAAGG GGTTTACAAG
ATTTGTAATA ACGCCTTTGA AGCCTTTGTC GGAAAACCTA GTCAAGAAAT TGTTGGAAAA
ACTGACTTTG ATCTTTTCCC CCCAGAAGAA GCCCTATTTT TTCGTGAAAA TGATCGCATT
ATGAGGGAAA AAAAACGCCC CCATCGTAAC GAAGAATGGA TCACTTATCC TGATGGGAGT
CGCCGTCTTT TAGATACCCT GAAAACCCCC TTTTGTTGCT CCGAAGGGAA GTTAATGGGA
GTGATTGGTA TTAGTCGAGA TATTACCGAT CGCAAACAAA AAGAAAACAC CGTCAAAAAA
CAAGCCAAAC GAGATAGTTT ACTCAGTAGT ATTGCTAGGC AATTAATCGA TCAAGACTTT
AATACTGCCG TTAACTTTAC CCTAGAAGCC TTGGGTCACT TTACCGATGG CGATCGCGGC
TACATTATCC GCTATTCCCC TCAGCAACGC CTCTGGAATA TGACCCATGA ATGGTGTAAT
TATCAGGTTC CCTCAACCCT ACAACAGTCA CAAAATATCC CCGTCGAATA CCTACCCTGG
TTCTCTCGCC AACTCCTCAA CGGTCAACCT ATTTGCGTCA ACTCCCTCGA TGATCTTCCC
CCCCAAGCGA TCGCCGAACG AGTGGTCTTT AAAAATAGTC TCAACCCCAC CCTAGTCGTC
GTTCCCATGG TAACAGCCGG TCAAACCGTC GGTTATTTAG GGTTTGATGC CAACTCTAGC
AAAATTTGGA CCCAAGAAGA GGTTAACCTC TTAAAATTAG TGGGAGAATT TATTGCGATC
GCCCAAGCGA GATCCCAAGC CGAAGACGAT CGCAAAGAGT CAGAAGCTAG ATTTGCAGGT
ATTTTAGATA ACGCCAATGA AGCGATTATT TCCATTGATG AACAGCAACA GATTACCCTA
TTTAACCATG CTGCCGAGAA AACCTTTGGC TATCAGGCCG TCAACGTTTT AGGACAACCC
TTTAACCAAC TCATTCCCCC ACGCTTCCAA GACAGCCACT ATCAATACGT TGAAGACTTT
AGTACCTGTT TAGAAACATC CCGACAAATG GTCGGCCGCC GTCCTGTTTT TGGTCGCCGT
CAAGATGGTA GCGAATTTTT AGCCGAAGTC TCCATTTCTA AAATTCAACT CAAGGGACGA
AAACTGTTTA CCGCCATTGT CAGGGACATT ACCGAACGTC AACAAGCCGA AGAAGCCCTC
AAACAAGCTA AAGAAGCAGC AGATGCTGCC AACCGCGCTA AAAGCGAATT TCTCGCCAGC
ATGAGTCATG AATTGCGGAC TCCCTTGAAT GCTATTTTAG GGTTTACCCA AGTCATGCGA
CGCGATCGCA CCCTTAACCC AGAACACCAG CAAAATCTCT CTATTATTTC CCGTAGTGGG
GAACATCTTC TCGAATTAAT CAACGACATC CTAGAGATGT CCAAAATTGA AGCCGGTCGC
ACCACGTTTC ATAGCAATAG CTTCGATCTC TATCGGTTGC TGGATAATTT AGAAGCCATG
CTGCATCTGA AAGCCCAAGA AAAAGGACTA CAACTGATCT TTGAACGCAC TCCAGAGGTT
CCTCAGTACC TAGAAACCGA TGAAGGAAAA TTAAGGCAAG TTTTGATTAA TTTATTGGGA
AATGCCATCA AATTCACCGA AGAAGGAGGA GTCACCTTAC GAGTGAAGTC AGAAGTCAGA
AGTCGTAAAG GCGGGTTTCG TGAGTCAGCG ACGTTAAGAA CCATCGATCT TGAAAAACCC
GCCCTAACAC CAATAATCGC CGACTCAGAA CAGATAGTGA TTACCTTTGA GGTAGAAGAT
AGTGGCCCCG GAATTGCCCC GGAAGAAGTC GATCAACTCT TCGCAGCCTT TGGACAAACA
GAAACCGGTC GTCAGGCCCA AGAAGGAACC GGGTTAGGCT TGCCCATTAG TCGCAAATTT
GTCCAATTAA TGGGGGGAAA TATTAGTGTT AGTAGTATTC TCGGTCAAGG GAGTTTATTC
GCTTTTAGCA TTAAAGCCAA GTTAACCAAT GCCAGTGCCA TTAAAACTCC AAAACCCATT
AGAAAAGTCG TTGGTTTAGC CCCTGGCCAA CCACAATACC GTATTCTGTC CGTAGATGAC
CGCTTAGAAA GTCGTTTACT CTTGGTTAAA TTACTCTCCT CCATGGGGTT TGAAGTCCGT
CAAGCCAGTA ACGGGAAAGA AGCCTTGGAG ATCTGGGAAA CGTGGGAACC CCATTTAATT
TGGATGGACA TGAGAATGCC AATTATCGAC GGTTATCAAG CCACTCAACG CATCAAAGCT
ACTACTAAAG GTCAGGGGAC GGTAGTTATT GCCTTAACCG CCAGTGCCTT TGAAGAGGAA
CGCAATATGG TATTATCGGC CGGATGTGAT GATTTTATGC GCAAACCCTT CCGAGAAGAG
GTTCTTTGGG AAAAAATCGC CCAACATCTA GGAGTCCGCT ATATTTATGA GTCTTTGGAA
CTAGAACAGG CACAAGGGAG AGAGATAGAA GAAAACCCAA CCGATAACCC CGATTATCTC
TTAAAATTGT TATCTCAAAT GTCTCCTGAC TGGGTTAATC AACTTCATCA AGTAGCCGTA
GAATGCAGCG ATGATGGCAT ACTAGAATTA ATTAGCAAAA TTCCCTCAGA AAGTCAACCT
TTAGCCATAA CTCTTAAGGG TTGGGCGGAT AATTTTCTCT TTGATCAAGT TATCCAATTA
ACCCAAAACT TGCTCAACAA ACAGGCAAAA TAA
 
Protein sequence
MSEQIIKQLQ QEIATLKAVQ QATLKIQQEL QESQERWQLI IQATNEGIWD WNLRTNELFI 
SPRWKEMLGY QDQELPNRFD TWKQLLHPQD VERVMEAVQN HLEGQTNHYQ IEFRLRCQDG
NYKWILSKGK ALWNSAGKAI RMVGSHSDIS DRKEEQILLR SLIDSIPDLI FCKDAQGVYK
ICNNAFEAFV GKPSQEIVGK TDFDLFPPEE ALFFRENDRI MREKKRPHRN EEWITYPDGS
RRLLDTLKTP FCCSEGKLMG VIGISRDITD RKQKENTVKK QAKRDSLLSS IARQLIDQDF
NTAVNFTLEA LGHFTDGDRG YIIRYSPQQR LWNMTHEWCN YQVPSTLQQS QNIPVEYLPW
FSRQLLNGQP ICVNSLDDLP PQAIAERVVF KNSLNPTLVV VPMVTAGQTV GYLGFDANSS
KIWTQEEVNL LKLVGEFIAI AQARSQAEDD RKESEARFAG ILDNANEAII SIDEQQQITL
FNHAAEKTFG YQAVNVLGQP FNQLIPPRFQ DSHYQYVEDF STCLETSRQM VGRRPVFGRR
QDGSEFLAEV SISKIQLKGR KLFTAIVRDI TERQQAEEAL KQAKEAADAA NRAKSEFLAS
MSHELRTPLN AILGFTQVMR RDRTLNPEHQ QNLSIISRSG EHLLELINDI LEMSKIEAGR
TTFHSNSFDL YRLLDNLEAM LHLKAQEKGL QLIFERTPEV PQYLETDEGK LRQVLINLLG
NAIKFTEEGG VTLRVKSEVR SRKGGFRESA TLRTIDLEKP ALTPIIADSE QIVITFEVED
SGPGIAPEEV DQLFAAFGQT ETGRQAQEGT GLGLPISRKF VQLMGGNISV SSILGQGSLF
AFSIKAKLTN ASAIKTPKPI RKVVGLAPGQ PQYRILSVDD RLESRLLLVK LLSSMGFEVR
QASNGKEALE IWETWEPHLI WMDMRMPIID GYQATQRIKA TTKGQGTVVI ALTASAFEEE
RNMVLSAGCD DFMRKPFREE VLWEKIAQHL GVRYIYESLE LEQAQGREIE ENPTDNPDYL
LKLLSQMSPD WVNQLHQVAV ECSDDGILEL ISKIPSESQP LAITLKGWAD NFLFDQVIQL
TQNLLNKQAK