Gene PCC8801_1267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1267 
Symbol 
ID7102171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp1312627 
End bp1314042 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content41% 
IMG OID643474351 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002371488 
Protein GI218246117 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAAA AAAATGAAAC TTCAGTCTTA ATTTTATCCC TCTTAATTAC CGCCGGGATT 
TTAGGAGTAG GTTATTGGTG GTTTAGCCAA AAATCTGGGT TAAAATTAGA TAATCTGACT
GAAAATAATC CCCTCAATTC CGTTGTTTCT CAATCCCTAT CAAATCGCTC AAGCATAGGA
GATAAACTCT TAATAACAGC CGATAGTACC CCCCAGAAAA AAGCCGGAAT TGAAGCTTGG
AACCAAGGAA AGATAGAAGA AGCGATCGCT CAATTCCAAG CCTCCTTACA ATTACAACCC
AATGATCCCG AAACATTAAT CTATCTTAAT AACGCCCAAG CTAATCAGAA AAACCCGATT
AAAATAGCCG TCGTTGTTCC CATTGGCACT AACTTAAATA TTGCCCAAGA AATCCTCCGG
GGAGTCGCCC AAGCACAACA TCAAATTAAT CAAGCAGGAG GCATTAATAA CCAATGGCTT
CAAGTGCTTA TTGTTAACGA TGATAATCAA CCTGAACTCG CCCAAAAACT CGCTAGTGAA
TTAGTGAAAG ATAGCCATAT TTTAGCCGTT GTTGGTCATA ATTCTAGTGA TGCAACCTTA
GCAGGCGGTC CTATCTATGA ACAAGGGCAA TTAGTAATGA TTACCCCCAC CAGTGACGCG
CAAAAAATTT CAACTTTGGG GGACTATATT TTTCGAGTGA TACCGAGTGT TCGTTTTCAA
GCCGATCTCC TCTCTCGTTA TACCATTAAA ACGGCCAAAA AAGCGAATAT TGCTATCTGT
TTTGATTCGA GTAGCGAAGC AAGCAAATCC TTAAAAGAAG ACTTTACTTC TGCTATTTTT
GCTGATGGTG GTCGCATTAG TGAAATTAAC TGTGATTTAG CCGAATCGAA TTTTCAGTCC
ATTGATAAAA TCTCCCAAGC CTTAGAACAA AAAGCTGACA GTTTGTTATT ACTTCCGGCC
GTTAATCACA TTAACATTGC CGTTGAAGTC GCTCAAGCCA ATCAAGGACG CTTAGCTTTA
TTAGGCAGTT CAACCCTTTA TACCTTTGAC ACCCTAAAAG AAGGAAAAGA CAGCGTTAAA
GGGATGGTAT TAACCGCTTC TTGGCATCCC CAAGGGATTC CTAATAATCC TTTTCCTAAA
CAAGCCAAAC AACTGTGGGG AGGCGATATT AATTGGCGCA CTGCCTTAGC TTATGATGCC
ACTCAGGCAA TTATTACAGG ATTTCAACAA GGGGAGATCA GTCGTCAAGG ACTGCAAAAA
ACCCTAGCTA ATCCCAATTT TTTCGCCGAA GGAGCCACCG GAAAGCTTCA ATTTTTACCC
TCAGGCGATC GCAGTGAAGG ACAGATTTTA ATTACGATTG TTCCAAGTCA AACGAATCCC
ACAGGCTTTG CTTTCGTTCC TCTCAAAAAT AATTAA
 
Protein sequence
MSQKNETSVL ILSLLITAGI LGVGYWWFSQ KSGLKLDNLT ENNPLNSVVS QSLSNRSSIG 
DKLLITADST PQKKAGIEAW NQGKIEEAIA QFQASLQLQP NDPETLIYLN NAQANQKNPI
KIAVVVPIGT NLNIAQEILR GVAQAQHQIN QAGGINNQWL QVLIVNDDNQ PELAQKLASE
LVKDSHILAV VGHNSSDATL AGGPIYEQGQ LVMITPTSDA QKISTLGDYI FRVIPSVRFQ
ADLLSRYTIK TAKKANIAIC FDSSSEASKS LKEDFTSAIF ADGGRISEIN CDLAESNFQS
IDKISQALEQ KADSLLLLPA VNHINIAVEV AQANQGRLAL LGSSTLYTFD TLKEGKDSVK
GMVLTASWHP QGIPNNPFPK QAKQLWGGDI NWRTALAYDA TQAIITGFQQ GEISRQGLQK
TLANPNFFAE GATGKLQFLP SGDRSEGQIL ITIVPSQTNP TGFAFVPLKN N