Gene PCC8801_1235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_1235 
Symbol 
ID7104927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp1286272 
End bp1287747 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content47% 
IMG OID643474320 
ProductNADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 
Protein accessionYP_002371457 
Protein GI218246086 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCAAA CTAACCGTGC AAAATGGGAT TTAACCAGGT TCTGGAACAC CTTAAACTAC 
TTTGAAATTG TTCCAGGGAT CAATATTGTA CAACGATTAC TCAACAAAGG CGATCGCCCC
TCAGTTAATT TATACCAAAA TAGTACCATG AACCGAATTT TAGTCGTCGG GGCTACCGGA
GGGGTAGGAA AACGATTGGT TCGTCTCCTG CAAGCAAACG GCTACCCCGT TCGAGTCCTC
GTCAGAGACA GTCAAAAAGC CCAAGAATTA CTCCCACCAG GGGTAGAAAT CATCGAAGGA
GACATTACTC GACCCGAAAC CCTCACCCCT AAATTAATCG AAAATATTGC TGCGGTGATT
TGCTGTACGG GAACTCGCGT TCAACCCGTC GAAGGAGATA CCCCCAACCG CGACAAATAC
TATCAAGGGG TCAAATTTTA TCTACCCCAA GTCGTCGATA GTCCCGAACA AGTGGAGTAT
CTAGGAATGA AAAACCTCAC CAAACTGGTG AAACAGTACC TTAGACCCGG GGAAAAAGTG
ATTTTTGACT TTACCCACCC CACGGAAGCC ATAAAGGCTG CTTGGGGGGC TGTAGATGAC
GTGGTGATGG GGGGAATTAG TGAAAGTTCA CTCCGTTTGG TCAACCAAAA AGCCATTTTT
TCGGGCAACG TTTCTACTGC CAATAATGGT GGGTTTGCCT CCGTTCGGAC GCGCAATTTT
GAGCCTCCCT TAGATTTATC GGGCTATGAA GGCATTCAAT TACAAGTCAA CGGTGATGGC
AAGCGATATA AGTTTATTAT TCGCTGCGAG GGCAAATGGG ACGGTCTGGG TTACTGCTAT
TCCTTCAATA CCTTCTCTAA CCGTCCTAGC AGCATCAGTA TTCCGTTTAA TGAGTTAATT
CCCGTGTTTC GGGCAAAAAC CGTCCCCGAT GCCGGGGCTT TTGATGCCAG TCGGGTCTAT
TCCATGCAGT TGATGCAAAC CAAGTTTGAG TACAATGGCG AATTAAACCC TCGATTTTCC
CCCGGTCTGT TTGGCTTAGA AATTGAATCG ATTAAAGCCT ACGGGGGTCA GCCTAAGACA
CCCCATTTTA TCCTAATTAG TTCGGCTGGT GTAACCCGCC CTGGGCGACC TGGATTGAAT
TTAGACGAAG AACCCCCGGC GGTGAGACTC AATGACCAAC TGGGGGGAAT TTTGACCTGG
AAATGGCGAG GAGAAGAGGT GGTGCGTCAA AGCGGACTTA ATTACACCAT TATTCGTCCC
TGTGCCCTCA CAGAAAAGCC TGGGGATAAA GGTCTGGTCT TTGACCAAGG GGATAACATT
AAAGGACAGG TCAGTCGGGA TGCGATCGCG GCTTTGTGCC TGGATATCTT AAAAAATCCC
CAAGCTGGTC AAAAAACCTT TGAGGTTCGC GAGGAAGACA CCCCTTTTAA TCCTCAAGAC
TGGGGTCAAG CGTTGGCTTC TCTAAGTTTG GATTAA
 
Protein sequence
MSQTNRAKWD LTRFWNTLNY FEIVPGINIV QRLLNKGDRP SVNLYQNSTM NRILVVGATG 
GVGKRLVRLL QANGYPVRVL VRDSQKAQEL LPPGVEIIEG DITRPETLTP KLIENIAAVI
CCTGTRVQPV EGDTPNRDKY YQGVKFYLPQ VVDSPEQVEY LGMKNLTKLV KQYLRPGEKV
IFDFTHPTEA IKAAWGAVDD VVMGGISESS LRLVNQKAIF SGNVSTANNG GFASVRTRNF
EPPLDLSGYE GIQLQVNGDG KRYKFIIRCE GKWDGLGYCY SFNTFSNRPS SISIPFNELI
PVFRAKTVPD AGAFDASRVY SMQLMQTKFE YNGELNPRFS PGLFGLEIES IKAYGGQPKT
PHFILISSAG VTRPGRPGLN LDEEPPAVRL NDQLGGILTW KWRGEEVVRQ SGLNYTIIRP
CALTEKPGDK GLVFDQGDNI KGQVSRDAIA ALCLDILKNP QAGQKTFEVR EEDTPFNPQD
WGQALASLSL D