Gene PCC8801_0964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_0964 
Symbol 
ID7105385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp1016030 
End bp1017571 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content42% 
IMG OID643474056 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_002371196 
Protein GI218245825 
COG category[T] Signal transduction mechanisms 
COG ID[COG2203] FOG: GAF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCAAG TCAAAGCAGT AGATTTAAGG GTTAATGGCG GTATGTCAAA TCTAACTAAT 
CGTCTTTTTT GTCGCTTAAA TGGCGTAGCA CCTGCCATAA GAGAGCAACA GCGAGTCACA
ACGTTAAAAA AGTTAGGATT ATTAGAAGCC GAGACTATTC CTGTCTTTGA CGAAGCTACT
CAAACGGCTG CGAGCTTTCT GGAAACGCCT ATCTGTATCC TAGGACTGAT GGTCCAAAAT
AATCTATGGC TCAAGGCTGC TGTTGGCTTA TCCCGATTAG GCTTAATGAA TCAATTAGCC
GCGTCTCGAC GTATTCCCCG TCAAGAAGCC TTTAGTACCT ATGTGGTTGA CAGTGAACAA
CCTGTGATCA TTAACGATAC CTTAGCAGAA TCGCCGTTTT GCCAGAGTCT GTTAGTACAA
CATTATGGGA TTCGGGCGTT TTTAGGCTCA CCTTTGATTA CGGCTGAGGG ACAATGTATT
GGCTCAATTG CGGTAATGGA TTTGGTTCCC CGTCAGTTTA CCCCTAGAGA CGTAGAATTT
TTAACCCTGA CAGCCCGGTG GTGTTTGGGG GAATTTGAAC GGGATTATCT CCTCAAACAT
CCCTCCCTTC CCCCAGAGGA ATCCCTCAGT TTTACAGAAA ATTCTGCTAA TTACAAGGGT
AATTTGCCAC AAAATAGCTC TGATGAGGTA ATCTTAACCA AAACTATCAA TAGTATTAAA
CTGAAGTTTC TCAGGCAATT AGTAGAAGAA TTGCAAGCTC CCTTAACCTC AGTTATCGGA
ATGTCGAGTG TTTTGCGTTC AGAAGTCTTC GGATCGTTGA GTCCTAAACA AAAGGAATAT
GTAGACATTA TTCACACCAG TGGACAACAA ATGAGTTCAC TGGTTCACGA AAGTCTTAAG
TTAGGGGTGG CTAATGATAA TACACCTCAA TTGGAACTGA GTCCGGTTAA TATAGAACTG
TTAGCTCAGC AAGTCTTTAA CAGTCTCGCA GATCTGGCCA AACAAAAACG ACAGACCCTG
CGGTTATCAG TTGAACCAGG GGAAAGAATT TGGCTCTTAG ACAAGGAAAA AGTCAGAGAA
TCCTTATATT ATTTAGTGAT TAGTCTCTTA CAATCCTCTG AAGCGGGGGG AGAAATTCGT
CTTCATATCT CCCGTCGGAG TCAAACCCTA AATATCGCTT TATGGCTTGC CCATCCCTGG
TTAGGGGATG GTTTACCTCA AGTCAATCTC TGTGCTTCTT CGAGTCCTAA CAGCTTAGGA
AATTTGCCCG ATGCTCCATC AGTATTGCCG CAAATATTGC CCTTTGAAGC CAATTTAGAT
GACTATGTTT TAACCGCTTC CTCTTTAGAA ACGATGATTA ATAGCCAAGT TAAGCTTAAT
ATGACTCATA ATCATTCACA AGATTTATTA GGATTATTGC TTGGGTGTTA TCTTATTGAA
AGTCAGGGAG GTCAAGTGAT GGTTCAGGGA TCTTCTGATT CTGGTTATCG TTATGTTTTA
ATGTTGCCCA AAATTTCCGC TAAAGACAAG TCTGCCTTTT AA
 
Protein sequence
MMQVKAVDLR VNGGMSNLTN RLFCRLNGVA PAIREQQRVT TLKKLGLLEA ETIPVFDEAT 
QTAASFLETP ICILGLMVQN NLWLKAAVGL SRLGLMNQLA ASRRIPRQEA FSTYVVDSEQ
PVIINDTLAE SPFCQSLLVQ HYGIRAFLGS PLITAEGQCI GSIAVMDLVP RQFTPRDVEF
LTLTARWCLG EFERDYLLKH PSLPPEESLS FTENSANYKG NLPQNSSDEV ILTKTINSIK
LKFLRQLVEE LQAPLTSVIG MSSVLRSEVF GSLSPKQKEY VDIIHTSGQQ MSSLVHESLK
LGVANDNTPQ LELSPVNIEL LAQQVFNSLA DLAKQKRQTL RLSVEPGERI WLLDKEKVRE
SLYYLVISLL QSSEAGGEIR LHISRRSQTL NIALWLAHPW LGDGLPQVNL CASSSPNSLG
NLPDAPSVLP QILPFEANLD DYVLTASSLE TMINSQVKLN MTHNHSQDLL GLLLGCYLIE
SQGGQVMVQG SSDSGYRYVL MLPKISAKDK SAF