Gene PCC8801_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_0962 
Symbol 
ID7104199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand- 
Start bp1014721 
End bp1015371 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content38% 
IMG OID643474055 
ProductSNARE associated Golgi protein 
Protein accessionYP_002371195 
Protein GI218245824 
COG category[S] Function unknown 
COG ID[COG0398] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTA AAATTCGTCA AACTCTTCCA TTGATTGCTA TATTTTTCCT CGTTATCCTA 
GCCATTTGGT CAATTAATTA CTTTGGGATA CAACGTCTTA GGGCTAATTT AGCTTATCTA 
GGAATTTGGG GTCCGTTGGG GCTTTTTACG TTGCGGTTTC TTAGTGTTGT TATTCCGGCT 
TTACCTGGAA CTGCTTACTC ACTCTTAGCA GGGGCATTGT TTGGTTTTAA CAAAGGGTTA 
TTGGTGATTT GTTTGGCAGA TTTTGCTTCG TGTACTTTGA GTTTTTATCT GTCTCGACAA 
TATGGCAGAG ACTTCATTGA AAGACTTGTT GGACATCGTT TTATGAGCCA AGTTGATCAT 
CTCAGCAAAC AGCATTTAGA AAGTAATTTT TTCCTGATGA GTGCCTTTCT GATGACAGGT 
TTTTTTGATT TTGTTTCTTA TGGGGTCGGC TTAACTAAGA CTTCTTGGAT GGTTTTTTTG 
CCAGCATTAT TGATGAGACT TGCGGTTTCT AATCCTCCGA TTGTTGCTTT GGGAGCTGGC 
ATTTTAGAAG GTGGGAAAAA GTTACTAGGA TTTGCTTTAA TAGGAGTGTT TGTGTTAGCG 
ATAATAACGG GAATTGTTCA ACAAAGACTA CGAAAAAAAC AGAATACTTA A
 
Protein sequence
MKAKIRQTLP LIAIFFLVIL AIWSINYFGI QRLRANLAYL GIWGPLGLFT LRFLSVVIPA 
LPGTAYSLLA GALFGFNKGL LVICLADFAS CTLSFYLSRQ YGRDFIERLV GHRFMSQVDH 
LSKQHLESNF FLMSAFLMTG FFDFVSYGVG LTKTSWMVFL PALLMRLAVS NPPIVALGAG 
ILEGGKKLLG FALIGVFVLA IITGIVQQRL RKKQNT