Gene PCC8801_0846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC8801_0846 
Symbol 
ID7103183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 8801 
KingdomBacteria 
Replicon accessionNC_011726 
Strand
Start bp886234 
End bp888867 
Gene Length2634 bp 
Protein Length877 aa 
Translation table11 
GC content47% 
IMG OID643473941 
ProductDNA topoisomerase I 
Protein accessionYP_002371082 
Protein GI218245711 
COG category[L] Replication, recombination and repair 
COG ID[COG0550] Topoisomerase IA 
TIGRFAM ID[TIGR01051] DNA topoisomerase I, bacterial
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACGC TTGTTATCGT CGAATCTCCG ACTAAAGCCC GTACTATCAG AAATTATCTA 
CCCAAAGGGT ATCGCGTCGA GGCATCCATG GGTCATGTAC GGGATCTCCC TGCCTCAGCC
GATGAGGTTC CGGCAGCCTA TAAAGATCAA AGTTGGTCTA ATTTAGGCAT TAATGTCGAA
AACGATTTTG AACCCCTCTA TGTCATCCCC AAAAGCAAGA AAAAGGTGGT TCAAGACCTT
AAATCAGCCC TCAAGGAAAC CGACGAACTC ATTTTAGCAA CAGATGAAGA CCGCGAAGGG
GAAAGCATCA GTTGGCATTT GATGGAATTA CTCAACCCCA AAGTCCCCAT CAAGCGCATG
GTCTTTCATG AAATTACCCG CGAAGCCATT CAAGCGGCGT TAAAAAATTG TCGTGATATT
GACCAAAATT TAGTCCGTGC CCAAGAAACT CGACGGATTT TAGACCGTTT AGTGGGCTAT
ACGGTTTCTC CCTTACTCTG GAAAAAAATT GCTCGCGGTC TCTCCGCCGG ACGGGTTCAA
TCTGTAGCTG TCCGTTTATT AGTTCAACGG GAACGGGAAC GCCTGGCCTT CCAATCTGGG
GGATATTGGG ATCTCAAAGC GTTATTGGAG AAGGATAAAA GTAACTTTGA AGCCAAGTTA
ATTACCCTAG CAGACAAAAA AATCGCCCAA GGAAGTGATT TTGACCCCAA TACCGGGAAA
ATTGCCCAAG GACGAGACGT GGTTCTTTTG AATGAATCAG AAGCCAACGC CCTGAAAGAA
CGCTTAGACG GGAAACCCTG GACAGTCACA AAAACGGAAG AAAAACCCAC CATCCGCCGC
CCTGCCCCTC CTTTTACCAC TTCGACGCTA CAGCAAGAAT CGAACCGAAA ATTAGGAATC
TCTGCTAGAG ATACCATGCG TATTGCCCAA AAACTCTACG AAGAGGGCTA TATTACCTAT
ATGCGGACGG ATTCTGTCCA CTTATCCGAA CAAGCCATCA CAGCAGCCAG GGATTGTGTT
ACGCAAAAGT ATGGCAAAGA ATACCTCAGT CCCAAACCCC GTCAATATAC CACTAAAAGC
AAAGGCGCCC AGGAGGCACA CGAAGCTATC CGTCCGGCTG GCAATCAGTT CCGTACCCCC
CAAGAAACGG GGTTAGGGGG TCAAGAATTT GCCCTCTATG ACCTGATTTG GAAGCGGACG
GTGGCTTGTC AGATGGCTGA TGCCCGTCTA ACCCAAATTA TTGTTAATTT ACTGGTAGAA
GATGCTGGAT TTCGGTCTTC AGGCAAACGG ATTGATTTTC CAGGGTTTTT CCGCGCCTAC
GTCGAAGGAT CAGATGATCC TGAAGCAGCC TTAGAAAACC AAGAGGTGAT CCTACCCCCG
TTACAAGAGG GAGATCATCC CAACTGTCAA CAATTGGACG TATTAGGACA CGAAACCCAA
CCTCCGGCGC GGTATACCGA AGCTTCCCTG GTTAAAACCC TCGAAAGTGA AGGGGTAGGT
CGTCCGAGTA CCTACGCTAG TATTATTGGG ACAATTATCG ATCGCGGCTA TGCCCAAATG
CGGAGTAAAG CTTTAGTCCC GACGTTTACT GCGTTTGCCG TGGTTAGTCT GTTAGAGGGA
CATTTTCCTG ACTTGGTGGA TACCAAATTC ACCTCGAAAA TGGAACAAAC CCTCGATGAA
ATTGCCACCG GGGAGGCACA ATGGCTACCC TATCTCAAGA ATTTTTATCT GGGAGACAAG
GGGTTAGATA CTCAGGTTAA GGTCAAGACC GAACAAATCG ATCCAGGGGT TGCTAAAGCC
GTTACCCTAG AGAATTTAGC AGCAACAGTC AAAATTGGGA AATTTGGACC CTATATTGAG
GTCAATCAAG GAGAAGAAGT CGTAACTGCT TCGATTCCGG CGGATTTAAC TCCGGCTGAT
CTCAATCCTG AACAGATAGC GACCATCCTT AAACAAAAAA TCGAAGGACC CGATAAATTA
GGGTTACACC CTGAAACCGG AGAAGGGATT TTTATCCTAA CAGGAACCTA TGGACCCTAC
GTTCAACTCG GAGAAGTTAG CGACGAAAAT CCTAAACCTA AACGCGCTTC TTTACCCAAG
GGAGTTAAAC CTGAAGATGT CACCCTAGAG ATAGCCGTTG GGTTGTTATC CCTTCCCCGT
TTATTGGGAA CCCATCCCGA AACCGGGGCG AAAATTAAAG CGAGTTTAGG ACGTTTTGGT
CCCTATGTGG TTCATGATCA AGGCAAAGAC GGAAAAGATT ATCGTTCGTT GAAAGCAGAA
GATGATATTC TAACTGTGAG CCTAGAACGA GCCTTAGAAT TGTTAGCCCA ACCGAAAAAG
ACACGCGGAG GAGGTCGCAC TGCCAAAAAA CCCTTACGGG AATTGGGTGC TCATCCCGAT
GATAAAGAAC CCGTCAATAT TTATGAGGGA CCCTATGGAA TTTACGTTAA ACATGGTAAA
GTTAATGCGG GTCTTCCTGA AGGGGAAACG GCAGAAACCT TAACCCTAGA AACCGCCTTA
GAATTGTTAG CAGCTAAAGC AGCAACTAAG ACAAAAACGA CTCGCAAATC GACCACAACT
AAAAGCACAA CCACTCGTAA ACGGACTAGC AAAACGACCC AATCAAAGGG TTAA
 
Protein sequence
MPTLVIVESP TKARTIRNYL PKGYRVEASM GHVRDLPASA DEVPAAYKDQ SWSNLGINVE 
NDFEPLYVIP KSKKKVVQDL KSALKETDEL ILATDEDREG ESISWHLMEL LNPKVPIKRM
VFHEITREAI QAALKNCRDI DQNLVRAQET RRILDRLVGY TVSPLLWKKI ARGLSAGRVQ
SVAVRLLVQR ERERLAFQSG GYWDLKALLE KDKSNFEAKL ITLADKKIAQ GSDFDPNTGK
IAQGRDVVLL NESEANALKE RLDGKPWTVT KTEEKPTIRR PAPPFTTSTL QQESNRKLGI
SARDTMRIAQ KLYEEGYITY MRTDSVHLSE QAITAARDCV TQKYGKEYLS PKPRQYTTKS
KGAQEAHEAI RPAGNQFRTP QETGLGGQEF ALYDLIWKRT VACQMADARL TQIIVNLLVE
DAGFRSSGKR IDFPGFFRAY VEGSDDPEAA LENQEVILPP LQEGDHPNCQ QLDVLGHETQ
PPARYTEASL VKTLESEGVG RPSTYASIIG TIIDRGYAQM RSKALVPTFT AFAVVSLLEG
HFPDLVDTKF TSKMEQTLDE IATGEAQWLP YLKNFYLGDK GLDTQVKVKT EQIDPGVAKA
VTLENLAATV KIGKFGPYIE VNQGEEVVTA SIPADLTPAD LNPEQIATIL KQKIEGPDKL
GLHPETGEGI FILTGTYGPY VQLGEVSDEN PKPKRASLPK GVKPEDVTLE IAVGLLSLPR
LLGTHPETGA KIKASLGRFG PYVVHDQGKD GKDYRSLKAE DDILTVSLER ALELLAQPKK
TRGGGRTAKK PLRELGAHPD DKEPVNIYEG PYGIYVKHGK VNAGLPEGET AETLTLETAL
ELLAAKAATK TKTTRKSTTT KSTTTRKRTS KTTQSKG