Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PCC8801_0843 |
Symbol | |
ID | 7103180 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 8801 |
Kingdom | Bacteria |
Replicon accession | NC_011726 |
Strand | + |
Start bp | 881391 |
End bp | 883403 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643473938 |
Product | transketolase |
Protein accession | YP_002371079 |
Protein GI | 218245708 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGTCGTTG CTACCCAGTC ACTCGAAGAA CTGTGCATTA ATTCTATCCG TTTTTTAGCC ATTGACGCTG TAGAAAAGGC AAAATCTGGA CACCCAGGGC TGCCCATGGG GGCTGCTCCG ATGGCCTTTG TCCTCTGGGA TAAATTCATG AGATTTAATC CCAAAAATCC TAAATGGTTT AATCGCGATC GCTTTATCCT ATCGGCTGGT CACGGCTGTA TGTTACAATA CGCCCTGCTC TACCTGACCG GTTACGATAG TGTCACCATC GAAGATATTA AACAATTCCG TCAGTGGGGG TCAAAAACCC CTGGACACCC CGAAAATTTT GAAACCGAAG GGGTAGAAGT CACCACCGGA CCTTTAGGAC AAGGGATCGC CAATGGGGTC GGTTTAGCCC TCGCTGAAGC CCACTTAGCG GCTAAATTCA ACAAATCCGA TGCTACTATC GTTGATCACT ACACCTACGT TATCCTTGGT GACGGATGCA ACATGGAAGG GGTGGCCGGT GAAGCTTGCT CCATTGCCGG ACATTGGGGT TTAGGAAAAT TAATCGCCCT CTATGATGAT AACCACATCT CCATCGATGG GTCTACCGAT GTGGCTTTTA CCGAAGATGT GTCAAAGCGT TTTGAAGCCT ACGGTTGGCA CGTTCTCCAC GTCGAAAATG GTAACACCGA TTTAGCAGCC ATTGCTAAGG CTATTGAAGA AGCCAAAGCC GTTACCGATA AGCCTTCGAT GATTAAAGTG ACCACCACCA TCGGTTATGG TTCCCCTAAT AAACAAAATA CCGCCGGAGT TCACGGGGCA GCTTTAGGAG CCGATGAAGT CGCTTTAACC CGTCATAATT TGGGTTGGCA ACACGAACCC TTCGATATCC CTCAAGATGT CCTAGGACAC ATGAATAAAG CCATCGATCG CGGTTCGAGT TATGAGGCAG AGTGGAATCA AGCTTTTGCG GCTTACAAGG CTAAATACCC CGCAGAAGCG GCTGAGTTTG AACGCTATCT GAGTAATAAA CTCCCCGACG GTTGGGACAA GGTACTTCCC ACCTTTACCC CCGAAGATAA AGGTATTCCC ACCCGTAAGC ATTCTGAAGT CTGTCTGAAC AAATTAGCTC CCATTTTACC CGAATTAATT GGGGGTTCAG CCGATTTAAC CCACTCTAAC CTCACCGAAA TCAAAATTTC TGGTGATTTC CAAAAAGGAC ATTATGAAAA CCGTAATGTT CACTTTGGGG TACGCGAGCA CGCCATGGGA GCTATCTGTA ATGGGATGGC GTTGCATGGT TCAGGGTTAA TTCCCTACGG TGCAACCTTC TTAATCTTCA CCGATTATAT GCGCGCAGCC ATCCGTCTGT CTGCCTTATC TCAAGCGGGG TCTATTTGGG TGATGACTCA CGACTCCATC GGACAAGGGG AAGATGGACC GACGCACCAA CCCATTGAAA CCTTGGCTTC TTTGCGGGCA ATTCCCGATT TAACCGTTAT TCGTCCTGCT GATGGTAACG AGTGTTCTGG AGCCTATAAA GTGGCAATTG AGAAGGCAAA ACAACACGCC CCTACTCTCT TGGCGTTTAC CCGTCAAAAT GTGCCTAATT TAGCCGGAAC TTCCATCGAA GGGGTGGCTA AGGGTGCTTA TGCGATCGTT GATTGTCAGG GAACTCCTGA TATCATTCTC ATTGGTACAG GGTCAGAAGT GAGTCTTTGT GTTGAGGCTG CTGCTAAACT CACCAGCGAA GGCAAGAAAG TTCGTGTCGT TTCCATGCCT TCTTGGGAGC TATTTGAAGC TCAAGATGCT GCCTACAAAG AGTCTGTTCT CCCCAAAGCG GTGACTAAGC GGTTATCTGT TGAAGCAGGT AGTAGCTTTG GTTGGGCTAA ATATGTCGGT TTTGGTGGCG ATAGCGTCAG TATTGACCGC TTTGGTGCTT CTGCTCCGGG TGGAACCTGT ATGGAGAAAT TTGGCTTTAG TGTTGATAAT GTCCTAGCTA AAGCTAAGGC TCTTTTAGGC TAA
|
Protein sequence | MVVATQSLEE LCINSIRFLA IDAVEKAKSG HPGLPMGAAP MAFVLWDKFM RFNPKNPKWF NRDRFILSAG HGCMLQYALL YLTGYDSVTI EDIKQFRQWG SKTPGHPENF ETEGVEVTTG PLGQGIANGV GLALAEAHLA AKFNKSDATI VDHYTYVILG DGCNMEGVAG EACSIAGHWG LGKLIALYDD NHISIDGSTD VAFTEDVSKR FEAYGWHVLH VENGNTDLAA IAKAIEEAKA VTDKPSMIKV TTTIGYGSPN KQNTAGVHGA ALGADEVALT RHNLGWQHEP FDIPQDVLGH MNKAIDRGSS YEAEWNQAFA AYKAKYPAEA AEFERYLSNK LPDGWDKVLP TFTPEDKGIP TRKHSEVCLN KLAPILPELI GGSADLTHSN LTEIKISGDF QKGHYENRNV HFGVREHAMG AICNGMALHG SGLIPYGATF LIFTDYMRAA IRLSALSQAG SIWVMTHDSI GQGEDGPTHQ PIETLASLRA IPDLTVIRPA DGNECSGAYK VAIEKAKQHA PTLLAFTRQN VPNLAGTSIE GVAKGAYAIV DCQGTPDIIL IGTGSEVSLC VEAAAKLTSE GKKVRVVSMP SWELFEAQDA AYKESVLPKA VTKRLSVEAG SSFGWAKYVG FGGDSVSIDR FGASAPGGTC MEKFGFSVDN VLAKAKALLG
|
| |